Gene Clim_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0260 
Symbol 
ID6353777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp292920 
End bp293513 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content54% 
IMG OID642667890 
Producthypothetical protein 
Protein accessionYP_001942334 
Protein GI189345805 
COG category[S] Function unknown 
COG ID[COG1833] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0029368 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCC AGCAGATTAC CTTTTCAGGT TCGAATGAAC GCCAGGGAAC CTACCTGCTC 
TTTATTTCGC TCTCAAAAAC GGTACGACTT GCTTTCGGCA GCTTCATGAA AGGCAAAACG 
CTGCTGCTTC CGGCAGGTCA TTACCTCTAT CTTGGCTCTG CACTCGGGAA CGGTGATAAC 
TCCTTTCCGC TTGCCCGGAG ACTCATCCGC CACACATCGA GAACCGGAGA CGGAAACCCC 
CATGCTATAC GCAAGGCGCT GCAAAGCGCA TTACGAAAAA ACCGGCTCGC CGGAGATCAC 
GCTCTCGGCA TAAAGCAAAA AAAACTGCAC TGGCATATCG ACTACCTTCT CGAATGCCCG 
GAATCACGCA TTACTCATAT AGTGATCATC AGAAAAGCGG AAAAACTTGA ACCAGTACTC 
TCCCGATACC TTGAAGCCCA TCCGGATACA TCCGTTTTCG CCCAACGGCT GGGAGCGCAG 
GACACGAAAA ACAGCACGCA CCTGCTGCAG TGCAACGACC CGGACGCTCT CCGGGAACAA 
CTCCTCAGGG ATCTGCCGGG TATCGTGTCC GCCTGTGACG ATCACTCCTG CTGA
 
Protein sequence
MTGQQITFSG SNERQGTYLL FISLSKTVRL AFGSFMKGKT LLLPAGHYLY LGSALGNGDN 
SFPLARRLIR HTSRTGDGNP HAIRKALQSA LRKNRLAGDH ALGIKQKKLH WHIDYLLECP 
ESRITHIVII RKAEKLEPVL SRYLEAHPDT SVFAQRLGAQ DTKNSTHLLQ CNDPDALREQ 
LLRDLPGIVS ACDDHSC