Gene Clim_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0221 
Symbol 
ID6354677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp244392 
End bp245063 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID642667852 
Productintegrase domain protein SAM domain protein 
Protein accessionYP_001942298 
Protein GI189345769 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAACA CTCTTCCGAT CCTCGAAAAA CGGGCACTTT CAGCACCGGA GTTTCATGCT 
CTCAAGGCAA TGCCTCTGGA ACTCGAATGG TATGCCAATA TCCGGAGTGA GAAGACCCGA 
CGGGCTTACC GCAACGACGT GAAAGAATTA TCCCGATTTC TCGGCATCAC GGAACCAGAA 
GAAATGCGCA TTGTTACCCG AGCGCACCTG CTTGCCTGGA GAACCGATCT TGAACAGCGT 
AACCTTGCTG CCGCCACCAT CCGGCGCAAG CTTGCTTCGA TCTCTTCGCT TTTCGACTAC 
CTCTGTGAAC AGAATGCCGT ATTGCATAAC CCGGTTCTTG GCGTAAAACG TCCCGCTGCA 
AACAACAACG AAGGCACGAC GCCTGCCCTT GGTGACAGCC AGGCAAGAAT GCTACTTGAT 
GCCCCGCCGG CGAATACCCT TAAAGGAAAA CGAGACAGGG CAATTCTCGC TACCCTGCTC 
TACCATGGGT TGCGCAGGGA AGAACTTTGT CGGCTACAGG TTAAAGATTT GCAGCAACGG 
AGCGGCGTGC AGCATTTATG CATCCACGGT AAACGGGAAA AGATCCGGTT TCTGCCGATG 
CATCCGATGG CTCAGCGGTT AATTGATGAG TATCTTGCAG GAGCTGAGGG GACGCAGTGC 
AACAGGAGCT GA
 
Protein sequence
MTNTLPILEK RALSAPEFHA LKAMPLELEW YANIRSEKTR RAYRNDVKEL SRFLGITEPE 
EMRIVTRAHL LAWRTDLEQR NLAAATIRRK LASISSLFDY LCEQNAVLHN PVLGVKRPAA 
NNNEGTTPAL GDSQARMLLD APPANTLKGK RDRAILATLL YHGLRREELC RLQVKDLQQR 
SGVQHLCIHG KREKIRFLPM HPMAQRLIDE YLAGAEGTQC NRS