Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0194 |
Symbol | rplJ |
ID | 6354650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 212970 |
End bp | 213488 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642667826 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001942272 |
Protein GI | 189345743 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000548969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGG ATAAAAAAGA GCAGGTAGTC CAGGAGGTCG CTGAGAAAAT CGGCAGATCC CAGGGAATAT ATTTGACGGA ATATCAGGGC TTGAACGTTG CCAAAATGGC GGAACTTCGC AATGAGTTCA GAAAAGCCGG TATCGAATAC AAGGTTGTCA AGAATACTCT CGTCAAGCAG GCGCTTCTGC AGCTTGCCCA GGCAGACAAG CTTGCCGACG GCCTGAAAAG CACTACTGCG GTTGCTTTTG GTTATGATGA TCCTATCGCT CCGGCCAAAA TCATCAGGAA GTTCAGCAAG ACCAATGAAG CGCTGAAGTT CAAGATGGCG GCAATTGACG GAATTGTTTA TGGCGACGAC AAGCTTGTCA TGCTCTCCGA GATGCTGAGC AAAACCGAGA ATATCGGTCG TACTGCGGGG CTCATCAACA ATGTTGTCAG TTCCGTACCG ATGGTTGTCA ATGCGGTCAT GAGAAACCTG GTTTCGGTTC TCGATCAGGT TGCCAAACAG AAGCAGTAA
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Protein sequence | MKRDKKEQVV QEVAEKIGRS QGIYLTEYQG LNVAKMAELR NEFRKAGIEY KVVKNTLVKQ ALLQLAQADK LADGLKSTTA VAFGYDDPIA PAKIIRKFSK TNEALKFKMA AIDGIVYGDD KLVMLSEMLS KTENIGRTAG LINNVVSSVP MVVNAVMRNL VSVLDQVAKQ KQ
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