Gene Clim_0155 details

Gene Information

• Locus tag: Clim_0155
• Symbol: infC
• ID: 6356125
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 171300
• End bp: 171941
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642667782
• Product: translation initiation factor IF-3
• Protein accession: YP_001942233
• Protein GI: 189345704
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAC AGAAGACGAC GACTCAGAAG CCGAAACTCA CCTACCGGGT CAACGAACAG 
ATCCGTGTTC CGGAAGTGCG TATTGTCTTT CAGGATGGCA CCCAACAGGT CATGAAAACC 
ATCGAGGCGA GACGTATGGC TGAAGATCGG AATCTCGACC TTATCGAAGT GCAGCCCAAT 
GCGGAACCCC CGGTATGTAA ACTGGACAAT CTGGGCAAGC TTCTCTTTAA AATGGACAAG 
AGGGATAAAG ACCTCAAGAA AAAACAGAAA ACCACAACGC TCAAGGAGCT GCGCTTTCAT 
CCCAATACCG ACAAGCACGA CTTCGATTTC AAGACAGCCC ACCTCGAGGA GTTTCTGCGT 
AAAGGCAACC GGGTACGGGC AACGATCGTC TTTCTCGGAC GTTCGATTAT CTATAAGGAT 
AAAGGTCTTG AACTTGCTGA ACGCCTGACA GAACGGCTCA GCTGTGTCAG CAATCGGGAT 
GGCGACCCTA AATTCGAAGG GAAAAAGCTA TTTGTCTACT TCGAGCCCGA TAAGAAAAAA 
ATTGATGCCT TCGAAAGAAT AAAAGCAAAA ACAAGCGGTC CGGCACCTGC ACCGGCACCC 
TTACCTGTAC CGGCACCCGA ACAGAAAGAG ACGCCGGAAT AG 

 

Protein sequence

MKKQKTTTQK PKLTYRVNEQ IRVPEVRIVF QDGTQQVMKT IEARRMAEDR NLDLIEVQPN 
AEPPVCKLDN LGKLLFKMDK RDKDLKKKQK TTTLKELRFH PNTDKHDFDF KTAHLEEFLR 
KGNRVRATIV FLGRSIIYKD KGLELAERLT ERLSCVSNRD GDPKFEGKKL FVYFEPDKKK 
IDAFERIKAK TSGPAPAPAP LPVPAPEQKE TPE