Gene Clim_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0143 
Symbol 
ID6356113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp163926 
End bp164342 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content50% 
IMG OID642667770 
Productthioesterase superfamily protein 
Protein accessionYP_001942221 
Protein GI189345692 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.320461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGA ATTCCACCTA TGCATTCACC CTTGAACTTG ATGTCCGCGA TTACGAATGC 
GACTTGCAGG GCATCGTCAA CAACAGTGTC TACCAGAACT ATCTTGAGCA TGTTCGCCAT
GTTTATCTGA AGCAGGTCGG GATAGATTTC GCCGAATATG CCCGTCAGGG GATCAACCTT
GTCGTCGTGC GTGCGGAACT CGATTACAGG CATCCGCTTA AAAGTGGCGA CCGGTTTGTT
GTCGGGTTGA ACTTCATGAG GGAGTCGCAA CTGAAGTTCG CTTTTTATCA GGATATCTGC
CGCCTGCCGG ACATGAAGCC TGTCGTTAAG GCGAAGATCA TCGGTACTGC GCTGAATAAA
AGAGGCCGAC CGGAAATTCC TGAGAAACTC GATGCGTTGA TGGTCAGACC TGCATGA
 
Protein sequence
MDMNSTYAFT LELDVRDYEC DLQGIVNNSV YQNYLEHVRH VYLKQVGIDF AEYARQGINL 
VVVRAELDYR HPLKSGDRFV VGLNFMRESQ LKFAFYQDIC RLPDMKPVVK AKIIGTALNK
RGRPEIPEKL DALMVRPA