Gene Clim_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0048 
Symbol 
ID6355571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp53452 
End bp54261 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content59% 
IMG OID642667673 
ProductMethyltransferase type 11 
Protein accessionYP_001942135 
Protein GI189345606 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCC GCACATCGCC CCGGGAGGGA TCCCGCCATC AATTCCACGA CCACTTTTCC 
GGAGTATCGG CAAACTATGC CGCCTTCCGT CCTTCGTACC CGGAAACGCT CTTCAGGTGG
CTGGCATCGG TTGCGCCGGC ACGAAGCCAC GCATGGGACT GCGCGACCGG CACCGGACAG
GCGGCTCTTG GTCTTGCCCG GTATTTCGGG CACGTCACGG CAACCGATGC CAGCCGGGAA
CAGATAGCGG CCGCCGCGTT GCATCCCCGT ATCGATTACC GGATTGTACC GGCCGAGGCT
TCGGAAATAC AAACAGGAAG CGTCGATCTG GTTACGGTTG CGCAGGCCCT GCACTGGCTC
GATATCGGCC GGTTCTTCAG GGAAGCGGAG AGGGTGCTTG TCCCTGGCGG GGTGCTTGCC
GTATGGGCAT ACGGAGCTGT TGCGGTGGAA GGGCCGGAAA CCGGAGAGAT CATAAGGGAG
TTCTATCACG ACGAGATGGG ACCATACTGG CCTGAAGAGC GGTCGATGGC AGACTCCGGT
TATGCAGACA TTGAACTGCC GATGCCTGAA CTGAAGAGCC CGGTATTCAG CATGCGCGTT
TCGTGGACAA GGGAGGAACT GCTCGGTTAC ATACGAACCT GGTCCGCCGT CAGCCGGTTT
ATCGGCAAAA ACGGTCGCGA TCCCGTTGCC GGCCTGGAAA AAAGGCTCGT TCTGCACTGG
AACGACGCCT CCCGAAGAAC GGTTGCATGG CCGCTCACAC TCAAAGCCGG CCGGACAAGC
AATGAAAAAC CGTCTTCGCT TTTCTGTTAA
 
Protein sequence
MNSRTSPREG SRHQFHDHFS GVSANYAAFR PSYPETLFRW LASVAPARSH AWDCATGTGQ 
AALGLARYFG HVTATDASRE QIAAAALHPR IDYRIVPAEA SEIQTGSVDL VTVAQALHWL
DIGRFFREAE RVLVPGGVLA VWAYGAVAVE GPETGEIIRE FYHDEMGPYW PEERSMADSG
YADIELPMPE LKSPVFSMRV SWTREELLGY IRTWSAVSRF IGKNGRDPVA GLEKRLVLHW
NDASRRTVAW PLTLKAGRTS NEKPSSLFC