Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1770 |
Symbol | |
ID | 6332044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1830043 |
End bp | 1830966 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642658043 |
Product | protein-export membrane protein SecF |
Protein accession | YP_001931919 |
Protein GI | 188997668 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAATT TTATGGTAGA ACCACCAAAT ATAGACTTTT TAAAGATTAG AAAAATAGGC TATGGGATAT CTTTAAGCTT GTTAATTTTA AGCTTTGTTT TATTCTTTAC GAAAGGGTTT AATCTTGGGC TTGATTTTAC AGGTGGAACG TCGATTCAAG TTAAATTTAA CCAGCAGATA AGAGTTTCTG ATATTAGAAA TCTACTTAAA GATGTAGATT TAGCAGACTC TTTAATTCAA GAAGTAGGAA CTAACAAAGA TGAAGTCGAA ATTAGAGTAC CGGCTAAAAA GGGAAGTTCA AGCGTTGTTC TTGAAAAAGT GAAAAAAGCA TTAGATAGCA AATACCAAGG TCAGTATGAG ATAAGAAAGG TAGAGTTTAT AGATGCTTTG GTTGGAAGTG AGATGGCAAA AGCCAGCGTG TACTCTATGG TTTTTGTAAT GCTTGGGATT TTACTTTTTG TAGGTTATAG ATATGAGCCT TTATTTGCAA TTGCAGCTGT AATTCCCCTG TTCCATGATG CAATCATCAC ACTTGGTATA TTCTCACTTC TTGGAAAAGA GATAGACCTT ACAGTAATTG CGGCAATCTT AACAGTTCTT GGGTACTCTT TAAACGATAC AATCATCGTT TTTGATAGAA TCAGAGAAAA CATAAAAGCC CGTGGAAGAA AAAATATGGA AAGCATCATT AACAGAAGTA TTAACGAAAA CTTAGCAAGA ACGATAATCA CATCAGGAAC AGCATTATTT TCTGTAATTG CGATATACTT TTTTGGTGGA GAATCTCTTC AAAACTTCGC ATTAGCACTG CTTATAGGTA TTGTTTTTGG TACTTACTCA TCAATTTACG TTGCTGCACC TTTGATTTTA GAAGTTGAAA AAATTTTAAG AGCAAAAGCA AAAAAAGAAA CGGTAGGAGC GTAA
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Protein sequence | MRNFMVEPPN IDFLKIRKIG YGISLSLLIL SFVLFFTKGF NLGLDFTGGT SIQVKFNQQI RVSDIRNLLK DVDLADSLIQ EVGTNKDEVE IRVPAKKGSS SVVLEKVKKA LDSKYQGQYE IRKVEFIDAL VGSEMAKASV YSMVFVMLGI LLFVGYRYEP LFAIAAVIPL FHDAIITLGI FSLLGKEIDL TVIAAILTVL GYSLNDTIIV FDRIRENIKA RGRKNMESII NRSINENLAR TIITSGTALF SVIAIYFFGG ESLQNFALAL LIGIVFGTYS SIYVAAPLIL EVEKILRAKA KKETVGA
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