Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1749 |
Symbol | |
ID | 6332693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1809017 |
End bp | 1810393 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642658024 |
Product | outer membrane efflux protein |
Protein accession | YP_001931900 |
Protein GI | 188997649 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGGA AGATTGTTTT GGCAACACTA ACTGCTATTT CTGTTAGCTA TGCTAAGGAT TTAACACTAC AAGAAGCTAT AGAAACAGGA TTAAAGAACA ACTATGAAGT AAAAGCAACA GAAAATCTTT TAAAGTCTAA AGAATATCAA TATGAATCTG CCAAAGGAAT GAGACTTCCA AGTTTAACAT TTTCAGAAAT GTTTATGAGA ACAAACGAGC CGGGCTTTGC AATGTGGAAC ACTATGAGCC AAAAGAAGCT TGATTTTATG ACTTCTTCAA AATTTGTTGA TATGACAGCT ATGAATCCTA TGTTTTCTAA ACCATCATAT CCGGAAGTAA ACGCATGGAA AACAAAGCTT GAGCTTCAAC TTCCAATATA TACAGGTGGA AAATTATCAT CTGGAATAGA TATGCAGAAA AAAGATTATG AAGCAACAAA AAAAGATTTG GTAAGAGCAA AAGAAAAGGC TATCTATGAC ATATCAAAAG CTTACTATGG AGCTTTACTT GCAAAAGAAG CAATTGACCT TGCAAATCAG GCATATAAAG ATGCTGAAAA GCATTACAAC ACAGCTGTTA GCATGGTAAA AAATGGTCTT GCTATACCGG CAGATGAATT GAGAGCAAAA GTTTATTTGT CTGATATGAA GTCAAAAATA AAAGAAGCAG AAAACAATTA CTTAGTAGCA AAAAGAGGAC TGCTTTTAGC AATGGGCTTG GATAAAGTAG ACCCATCAGA AATAGATGTA GTAGGGCATC TTCAATGCGA AACTATAAAT GGTTCTGTGG AAGATTATCA AAATTATGCA CTATCTCACA GGTCAGACCT TATTGCTATC AGAGAAAAAG TTAAAATTGC AGAAAAGATG ATAGAGTTTA ACAAAGCAGA TATGCTTCCA ACAGTTGGAG CGTTTGCATC TTATGAATTA AACGATGGTA AATGGATGCT TGGGAACGAA GGGAAATGGT GGATGGCAGG CGTTGCTCTA AACTGGAAAA TATTTGATGG TTTTCAATCT TTCAATAAAT ATAAAAGTGC AAAAGAAACT TATAATCAGT ATAAACAACA AGAAAAAGGA TTTGAAGAGT TTATAAAATT TAGCGTGTAT AAAGCTTACA AAGACAATCA AACAGAGCAG GAAAAATTAA AGACTGCTGA GGAAAATTTA AAGTACGCGC AAGAGATTTT AAAAATAACA GAAGTAAGAT ATAAAAATCA GCTTGCATCT ATGATTGATT TACTTGATAC ACAAACAATG TATGACAAAA TAAAGTTTGA CAAGGCACAA GCAGAGTATA ACTGCCAATT GTCAGTATTA GAACTAAAAT ATCAAACTGG AAAATTAATT GAAGAAAATC AAAAGAGAGG AGAGTAA
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Protein sequence | MKRKIVLATL TAISVSYAKD LTLQEAIETG LKNNYEVKAT ENLLKSKEYQ YESAKGMRLP SLTFSEMFMR TNEPGFAMWN TMSQKKLDFM TSSKFVDMTA MNPMFSKPSY PEVNAWKTKL ELQLPIYTGG KLSSGIDMQK KDYEATKKDL VRAKEKAIYD ISKAYYGALL AKEAIDLANQ AYKDAEKHYN TAVSMVKNGL AIPADELRAK VYLSDMKSKI KEAENNYLVA KRGLLLAMGL DKVDPSEIDV VGHLQCETIN GSVEDYQNYA LSHRSDLIAI REKVKIAEKM IEFNKADMLP TVGAFASYEL NDGKWMLGNE GKWWMAGVAL NWKIFDGFQS FNKYKSAKET YNQYKQQEKG FEEFIKFSVY KAYKDNQTEQ EKLKTAEENL KYAQEILKIT EVRYKNQLAS MIDLLDTQTM YDKIKFDKAQ AEYNCQLSVL ELKYQTGKLI EENQKRGE
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