| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1712 |
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| Symbol | |
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| ID | 6331436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1771940 |
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| End bp | 1772671 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657987 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001931864 |
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| Protein GI | 188997613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000199289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATAA AAAACTACAA GCTTGAAATC AGTTATATTG GAACTAACTA CAACGGTTGG
CAAAGGCAGA AAAACGGAAT TGGAATTCAG CAAGTCATTG AAGATTTATT ATCTGAGCTT
TTGGAAGAAA AAATAACGCT GATTGGTGCA GGAAGGACTG ATGCAGGCGT TCATGCTTTA
AGGCAGGTTG CAAACTTTAA AACGAAAAAA CATAAAAACA CAAAGACCAT ATATACCTAT
CTTAATGCAA AACTGCCAAG AGATATTTCA ATTTTGAAAG TTGAAGAAGT GCCACTTTCT
TTTAATGCAA GATTTTCAGC CAAAGGAAAG ACATACCTTT ATAAGATAAA CACAAAGCCA
GACCCATTTT TGTTTAAACT TGCTTGGTAT TATGATAAAA AATTAGACTT GATAAAGATG
GTAGAAGGAA TTAATTTAAT AAAGCAGTAT AAAGACCTTT CTTCTTTGGC AAAAGCAGGG
GATTATATAA GAAAAGAAAT CGATTTAAGA GAGCTTAAGT TATACTTTGA TGGTAAAATC
ATAACCATAG AAATTACAGC ATCTCACTTT TTAAGAAATA TGGTCCGTAG AATTGCAGGA
CACCTTGTCG CACTTGGAAG AGGTAGCTTA AGCTTAGAAG AGTTAAAAGA TATAATAGAA
AAGAAAAGTC CATCCCATGG TAAATTTACA GCACCACCGG AAGGTTTATA TTTAAAAGCA
GTGTATTATT AG
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| Protein sequence | MEIKNYKLEI SYIGTNYNGW QRQKNGIGIQ QVIEDLLSEL LEEKITLIGA GRTDAGVHAL
RQVANFKTKK HKNTKTIYTY LNAKLPRDIS ILKVEEVPLS FNARFSAKGK TYLYKINTKP
DPFLFKLAWY YDKKLDLIKM VEGINLIKQY KDLSSLAKAG DYIRKEIDLR ELKLYFDGKI
ITIEITASHF LRNMVRRIAG HLVALGRGSL SLEELKDIIE KKSPSHGKFT APPEGLYLKA
VYY
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