| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1620 |
|---|
| Symbol | |
|---|
| ID | 6332471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1680586 |
|---|
| End bp | 1682100 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642657895 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_001931772 |
|---|
| Protein GI | 188997521 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0802007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTAA TAAGAGCTGA TGAAGTATTA GAAAGTTTAA ACAAACAAAT TGAGGAATTT
CAAGTAAGTG CAAACTTAGA AGAGGTCGGA ACGGTTATCC AAGTTGGTGA CGGTGTTGCT
CGTATCTACG GTCTTGAAAA GGCTATGATG GGTGAGATGC TTGAGTTTGA AAGTGGAATC
GTTGGCGTTG TGTTCAACCT TGAAGAGGAC AACGTTGGTG CGGTTTTACT TGGTTCAGAC
GTAGCCGTTA GAGAGGGTAG CATAGTTAAA AGAACTGGAA AAATCCTGTC TGTTCCAGTA
GGAAAAGGCT TGCTTGGAAG AGTTGTTGAT GGACTTGGAA ATCCAATTGA TGGAAAAGGA
CCATTAACAG ATATAGCATA TTATTCTCCG GTTGAAAAAA TTGCTCCGGG GGTTGTAAAA
AGAAAATCTG TTCACGAGCC ACTCCAAACC GGTATTAAAG CTATTGACGC GATGATTCCA
ATCGGAAGAG GACAAAGGGA GCTTATCATT GGTGATAGAG CAACAGGTAA AACAACAATC
GCAATAGATA CAATCCTAAA CCAAAAGGGT CAAGGAGTAT ACTGTATTTA CGTTGCAATC
GGTCAAAAGA GGGCTAACGT AGTTCATATA GTTGAAACAT TACAAAAACA CGGTGCTATG
GAATATACAA CTGTAGTTGC TGCTACATCT TCAGACCCAG CAACAATGCA ATACATAGCT
CCGTTTGTAG GATGTACAAT TGGTGAATAT TTCAGAGACA ATGGAATGCA TGCATTAGTT
ATTTATGACG ACTTGACAAA GCATGCTTAC GCATACAGAC AGTTATCATT GCTATTAAGA
AGACCACCAG GAAGGGAAGC TTATCCAGGT GACGTTTTCT ACTTACATTC AAGATTGCTA
GAAAGAGCTG CAAAACTAAA TGATGAGCTT GGGGCAGGTT CTTTAACAGC ATTGCCTATC
ATTGAAACTC AAGCAGGTGA CGTTGCAGCT TACATTCCTA CAAACGTTAT TTCTATTACG
GACGGTCAGA TATTCTTGGA AGCAGACCTT TTCTATAAAG GTATCAGACC TGCTATTAAC
GCCGGTATCT CTGTATCAAG GGTTGGTGGT GCAGCACAAA TTAAAGCTAT GAAGCAAGTT
GCAGGTACAT TAAGACTTGA CCTTGCACAA TACAGAGAAC TTGAGGCATT CGTTCAGTTT
GCTTCTGAAC TTGATAAAGC TACACAGGCA CAAATTGCAA GAGGACAAAG AATGGTTGAG
CTTTTAAAAC AACCACCAAA CCAACCTGTT CCGGTTGAAA AACAAGTTGC GATTATATAT
GTAGCCGGAC AAGGATATTT AGACGATGTT TCGGTTAATG CAATACAAAA ATTTGAAAAA
GAATTTTATG TATTCTTAGA TACAGAAAAA CCGGATATCT TGGAAGCAAT CAGAAGAGAA
AAAGCATTAA CAGATGATAT AAAAGCTAAA CTTGATGCTG CTGTTAAAGA ATTCAAACAA
AAGGTAGCAT TCTAA
|
|---|
| Protein sequence | MSVIRADEVL ESLNKQIEEF QVSANLEEVG TVIQVGDGVA RIYGLEKAMM GEMLEFESGI
VGVVFNLEED NVGAVLLGSD VAVREGSIVK RTGKILSVPV GKGLLGRVVD GLGNPIDGKG
PLTDIAYYSP VEKIAPGVVK RKSVHEPLQT GIKAIDAMIP IGRGQRELII GDRATGKTTI
AIDTILNQKG QGVYCIYVAI GQKRANVVHI VETLQKHGAM EYTTVVAATS SDPATMQYIA
PFVGCTIGEY FRDNGMHALV IYDDLTKHAY AYRQLSLLLR RPPGREAYPG DVFYLHSRLL
ERAAKLNDEL GAGSLTALPI IETQAGDVAA YIPTNVISIT DGQIFLEADL FYKGIRPAIN
AGISVSRVGG AAQIKAMKQV AGTLRLDLAQ YRELEAFVQF ASELDKATQA QIARGQRMVE
LLKQPPNQPV PVEKQVAIIY VAGQGYLDDV SVNAIQKFEK EFYVFLDTEK PDILEAIRRE
KALTDDIKAK LDAAVKEFKQ KVAF
|
|---|
| |