Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1579 |
Symbol | |
ID | 6331144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1633720 |
End bp | 1634277 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657854 |
Product | cytochrome c class I |
Protein accession | YP_001931731 |
Protein GI | 188997480 |
COG category | [C] Energy production and conversion |
COG ID | [COG4654] Cytochrome c551/c552 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00145947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CAAAGTTATT AATGGCAGCT TTATTATCCT CGGCAATAGT ATTAACATCT TGCCAAAAGA AAGAAGAGGC TCCAGCAACT GGAGAAGCAC AACCTGCTCC TCAACAACAA GCACAGCAAC CACAACAACC TGCACAACAA GAACAGCAAT CACAACAAGC TACAGAAACT AAGCAAGAAG TAAAAGAAGA AGCTAAGTCA CAAGAACAAA AACCAGAGGA GAAAAAAGTA GAGAAAAAGC AAGAGTCAGC TAAACCTAAG GAAGAAGCTA AACAACAAAC AGCTAAAGTA GACGGTGAAG CAATATTTAA ATCTAAAGGC TGTACTGCAT GCCATCAACC AAACGCAGAT ACTGTTGGAC CAGGATTAAA CAAAATTGCA TCTGCATATA AAGGAAATAA AGATGGGTTA GTTAAATTCT TAAACGGTGA AGGAAAAGCA ATTGTAGACC CTGCAAAAGA AGCTGTAATG AAACCAAATT TAGAAATTAC AAAGAAATTA TCTAAGGAAG AAAAAGGAGC ATTAGCCGAA TTTATTTTAA AACACTAA
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Protein sequence | MKKSKLLMAA LLSSAIVLTS CQKKEEAPAT GEAQPAPQQQ AQQPQQPAQQ EQQSQQATET KQEVKEEAKS QEQKPEEKKV EKKQESAKPK EEAKQQTAKV DGEAIFKSKG CTACHQPNAD TVGPGLNKIA SAYKGNKDGL VKFLNGEGKA IVDPAKEAVM KPNLEITKKL SKEEKGALAE FILKH
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