11 homologs were found in PanDaTox collection
for query gene SYO3AOP1_1579 on replicon NC_010730
Organism: Sulfurihydrogenibium sp. YO3AOP1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010730  SYO3AOP1_1579  cytochrome c class I  100 
 
 
185 aa  358  2e-98  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00145947  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0431  cytochrome c class I  64.71 
 
 
107 aa  116  1.9999999999999998e-25  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  unclonable  5.40538e-16  n/a   
 
 
-
 
NC_009441  Fjoh_0958  cytochrome c551/c552-like protein  36.97 
 
 
132 aa  80.1  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0722  Crp/FNR family transcriptional regulator  29.27 
 
 
800 aa  44.7  0.0008  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0446  cytochrome c class I  31.32 
 
 
169 aa  43.5  0.002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.0000000000000163065  n/a   
 
 
-
 
NC_012560  Avin_00360  Cytochrome c-551  32.22 
 
 
104 aa  42.7  0.003  Azotobacter vinelandii DJ  Bacteria  normal  0.66895  n/a   
 
 
-
 
NC_003910  CPS_4930  cytochrome c family protein  30.34 
 
 
229 aa  41.6  0.006  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1903  Carbohydrate binding family 6  28.05 
 
 
918 aa  42  0.006  Spirosoma linguale DSM 74  Bacteria  normal  0.602156  normal  0.263579 
 
 
-
 
NC_010531  Pnec_1037  cytochrome c class I  46.88 
 
 
96 aa  41.6  0.007  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.692369 
 
 
-
 
NC_009379  Pnuc_0802  cytochrome c, class I  31.33 
 
 
360 aa  41.2  0.008  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.641735  n/a   
 
 
-
 
NC_007498  Pcar_2549  hypothetical protein  28.28 
 
 
419 aa  40.8  0.01  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000354774  n/a   
 
 
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