| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1538 |
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| Symbol | |
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| ID | 6332016 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1579449 |
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| End bp | 1582644 |
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| Gene Length | 3196 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 34% |
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| IMG OID | 642923960 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00606767 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGG CAGATTTGCT TTTGAAGGTT GATGAAAAAT ACTATCCTCC AAAGGAGATA
GTAGAAAATG CTTGGGTTAA AGACTATGAA TCTCTTTACA AGAAGTCTAT TGAGAATAGA
GAGGCTTTCT ATGAAGAGAT TGCTAACGAA TTAGAATGGT TTCAAAAGTG GGACAAAGTT
TTAGAATGGA ACTATCCTTA TGCAAAATGG TTTGTAAATG CTAAAACAAA CATCACTTAT
AACTGTATAG ACAGGCATGT AAAAAATGGC AAAAGAAATA AGGTGGCTTT TATCTCTGTA
GATGAAGAAG GAAATGAGAG AAAGGTAACT TACGGTGGAG ACTTATCAAT AATTTTGTGT
CTGGATTGAA AACTTTTTAT TAAACAATTG TAAAATTTCA TAAGAAGCTC CTTTAAAAGC
AGGTATAGGT TTTTTCCATT TTCCATTCTT TAAATTATCT CTCTGTATAA GCAGATTTAT
CTCAAGAATG TCTACAGATT GAAAATATCC GCCTAAATTT ATTCTTACTT TCTCTATCAT
GCTATTAACA CTTTCAACTG GATTTGTTGT GTATATGTGC TTTCTTAGAT TTTCTGGATA
TTTTAAAAAA CATAAGTATC TCTCTTTGTT AGATTGAATA TGTTTTATAA AGCTTGGATA
TTTAGATTTA AATCTACTAC ATAAATCATC TAATTTTTCT AATCCATCTT CATAATCTAA
GCTGTTTTCT TTTATGTTTT TTAATTCTTT GTTAAATACT TGTGAATCTT CTTTATCCAT
CTGATTTCTA ACGTTTCTTT GTAAATGGAC TAAACATAGC TGATGGTCTG TATAAGGAAA
TAGTGTTTCT ATGGCTTTTG TTATCCCAGG AAAATCATCA CTTACTATAA GCATTACCCT
TTTTAGTCCT CTATCTATTA AATCATTGAA TACTTTTATC CAGTCTGCTT TGTTTTCACT
ACTGAAAAAT GTGTAAAATC CAAATATATC TTTATTTCCT TGTAAATCTA TTCCAAGAAC
TACATAGACA GAAGCCTTTC TGATTTTGTT TTTCTCTTTT ATATCACAGT GATATGCGTC
TATATACAGT ACAAATGCAT CCGATGGAAG CTCTCTTGTT TTAAAATCAT TAAGTCTTTC
TATAAGCTCT TTTTTGATTT TATCCATATG TTGTTTTGAA TAGTTTAAGC CTAAGCTTTT
TAATGTAGAA TCTATCTTGC TTTCTGAGTA TCCATTGGAT ACCAAACTCA TAAGAAGGTC
TATATAATCT TCATCAACTC TTTTGTAAGG GTCAGGTAAT ATTTGTGGTC TAAATTTACC
CTTTCTATCT CTTGGGACAT TTATGTTAAG CTTGAAAGAA CCAGTATTTA GGTTTCTTTC
GTAGTATCCA TTTGCTTTGT TATCTTCATC ATTTTCAAGG AAGAAATTTC TTTCCTGATT
CATGACCAGT TCTACAACAG ATTCTAAAAG CTTTCTTATA CCTATCTTTT CTTTGGTTGT
TATACCGTTT GGGAAAAATT CTTTTACTAA TTCCTCTGTG GATCTGTTTA ATACTTTTTC
AAAGTATTCT TTTTTATCCA TTATCATTCC TCCTTATAAA TTTAATTTAG ACACAACATT
ATTTTAACTC CCTTACGGTG AACTTTTAGA TTTAGTTAGC AGACTTGCAA ATGGATTAAA
ATCTCTTGGA ATTAAAAAAG GTGATAGGGT TTCTATCTAC ATGCCTAACA CTGTTGAAGC
TGCAATAGCA ATGCTTGCTT GTGCAAGAAT CGGAGCTATA CATAGCGTAG TTTTTGCAGG
ATTTAGCGAA GGAGCTTTAA AAATCAGAAT AGATGATGCT AAGGCTAAGG CTATAATTAC
TGCAACTTAT ACAAAAAGAA GGGGTAAAAA AATACCATTA TTTCCAACAG TAAAAGAAGC
AATTAAAGAT TTAGATTTTG TAGAAAAAAT AATACTTTTG GACAGAGATA ACGAGCTTTC
GGACGAGTAT GAAGAGCATA ACGTATTAGA TTTTTACAAG CTTATCAAAA ATTCATCTAA
AGATTGTCCG CCTGAGATTC AAGATGCAGA AGACCCATTA TTCATACTTT ATACATCAGG
AACAACTGGA AAGCCAAAAG GCGTTCTTCA TACAACTGGC GGATACATGG TTAATACATA
TATGACTTCA AAATATGTTT TTGACTTAAA AGAGAACTAT ATTTACTGGT GTACGGCAGA
CGTAGGTTGG ATTACTGGTC ATAGCTACAT TGTTTATGGA CCTTTGGCTA ACGGTGTTAC
TTCGATTATG ATGGAAGGCG TGCCGGTGTA TCCACATCCG GGTATTTGGT GGGAGTATGT
AGAAAAGTAT GGCGTTAACG TGTTCTACAC AGCACCAACT GCCATAAGAA TGTTAATGAG
ATTTGGAGAT GAGATACCGG CTAAGTATGA TTTGTCAACA CTGAAGGTTT TAGGTTCTGT
TGGTGAACCA ATAAATCCAG AGGCTTGGCT ATGGTACTAC AAAAACATAG GAAGAGGAAA
AGCGGTAATC GTTGATACAT GGTGGCAAAC CGAAACAGGA GCTCATATGA TTACAACAGT
TCCAAGCTAT CCTGCAAAAC CGGGTAAAGC TGGTAAACCA ATGTTTGGAA TTGAAGTTGC
AGTAGTAAAT AAGCAAGGAA ATCCAATGCC ACCAAATCAA GTTGGTCATT TGGTAATCAA
AAACCCATGG CCTTCTATGC TTAGAACTTG CTGGGGGGAG CCAGAAAGAT ATGAAAAATA
CTGGAATGAA ATACCCGGCT ACTATTCAGC AGGAGACTTA GCTGCAATAG ACGAAGAAGG
TTATGTGATG GTTGTTGGTA GAGCTGATGA TGTTTTGAGC GTAGCAGGAC ACAGAATCGG
TACTGCAGAA GTTGAGTCAG CTATTGTAGA AAACCATGCA GTAGCAGAAG CAGCTGTAAT
TGGTAAGCCA AATGAAATCA AAGGTGAATC TATCAAAGCG TTTGTAATCT TAAAAGAAGG
ATATGAGCCT TCAGAAGAGT TAAAAGAAAG AATTAAAGAC ACTGTAAGAG ATGTTCTTGG
ACCAATAGCT GTTCCTGATG AGATTGAGTT TGTTGATAAA TTACCAAAAA CAAGAAGCGG
AAAAATAATG AGAAGATTGT TAAAAGCAAG AGAACTTGGC TTAGAAATTG GCGATACTTC
AACATTAGAA GAATAA
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| Protein sequence | |
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