| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1407 |
|---|
| Symbol | |
|---|
| ID | 6332182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1448779 |
|---|
| End bp | 1449933 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642657687 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_001931566 |
|---|
| Protein GI | 188997315 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000685892 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCTCTTAT TACTGGTATA ACTGGACAAG ATGGGTCTTA TTTGGCCGAA
TTTTTATTAT CAAAAGATTA TGAAATTCAT GGTATCATTA GAAGAAGTTC AACCTTTAAC
ACACAAAGAA TAGACCATAT CTATGTTGAC CCTCACGACC CAAACGCAAG GTTATTTTTA
CATTATGGCG ACCTTTCTGA CCCTGGAGTC CTTACTGAAA TAATTTGGAA AATAAAACCA
GATGAAATTT ACCATCTTGG AGCTCAATCT CACGTTAAAG TGTCATTTGA TATGCCTGAA
TACACAGGAG ATATCACAGG ACTTGGAACA ACAAGACTCC TTGAAGCCAT TAGAAGAAGC
GGAGTAAAGG CAAAATTTTA TCAAGCTTCT TCCTCAGAGA TGTTTGGAGC TGCCCCTTCT
CCTCAGAACG AAAATACAAT CTTTTATCCA AGAAGTCCTT ATGCAGCTGC AAAAGTTTAT
GCTTACTGGA TGACAGTGAA TTATAGAGAA GCTTATAACC TTTTTGCTTG TAATGGTATT
TTGTTTAACC ATGAAAGCCC AAGAAGAGGA GAAACATTCG TTACCAGAAA GATAACAAGA
GCTCTAGCTA ACATTATAGC TGGTAAGCAA AAAATTCTAT ATCTTGGGAA CCTTTATGCA
AAAAGAGACT GGGGCTATGC TCCTGAATAT GTAAAAATGA TGTGGTTAAT GCTTCAACAA
GACGATCCAG ATGATTATGT AGTTGGAACG GGGGAAAGCC ATACGGTTAA AGAATTTGTA
AATTTTGCAT TTAGTTATGC AGGGATAGAG CTTGAATGGA GAGGCGAAGG TATAGAAGAA
AAAGGTATTG TTAAATCTGT TGAATCAAAT CTTACTAATC ATGTTAAACC AGGGGATATT
GTGATCGAAA TAGACCCAAG GTATTTTAGA CCAACAGAGG TTGAATTTTT ACAAGCAGAT
ATAGCAAAAG CTAAGCAAAA ACTTGGCTGG GAGCCGGTAG TAAAATTTGA GCATTTAGTT
AAAATTATGG TAGACTATGA CCTTCTCCAA AATGGAATAA AGCCAAAAGG AGAAGGGATA
AAAATTTCCA AAGAGCTTGG TTATGGTTGG ACTAATCATG AATACTCTTT CTATGAAAAA
CTACGTGAAA GATAG
|
|---|
| Protein sequence | MKKIALITGI TGQDGSYLAE FLLSKDYEIH GIIRRSSTFN TQRIDHIYVD PHDPNARLFL
HYGDLSDPGV LTEIIWKIKP DEIYHLGAQS HVKVSFDMPE YTGDITGLGT TRLLEAIRRS
GVKAKFYQAS SSEMFGAAPS PQNENTIFYP RSPYAAAKVY AYWMTVNYRE AYNLFACNGI
LFNHESPRRG ETFVTRKITR ALANIIAGKQ KILYLGNLYA KRDWGYAPEY VKMMWLMLQQ
DDPDDYVVGT GESHTVKEFV NFAFSYAGIE LEWRGEGIEE KGIVKSVESN LTNHVKPGDI
VIEIDPRYFR PTEVEFLQAD IAKAKQKLGW EPVVKFEHLV KIMVDYDLLQ NGIKPKGEGI
KISKELGYGW TNHEYSFYEK LRER
|
|---|
| |