Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1381 |
Symbol | |
ID | 6331689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1419875 |
End bp | 1420429 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642657663 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001931542 |
Protein GI | 188997291 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.419771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAA AGGATAAAAT TATCTTAGCA GCAAAAGAGC TGTTTTCTAC AAAAGGATAT CACGAGACGA AAGTCTCAGA TATTGTAGAA AAAGCCGGCG TCGCACAAGG AACATTTTAT CTATACTTTA AAAGTAAAGA AGATTTATTT TTAGAGCTGA TAAAAACTCT TCATCGCAGG CTTATGGAAG ATTTAGAAAA ATACTATCAC AAAGAAGATA GCTTTGAAGT TAAAATAAAG AATCTTTTAG AAGATTTTAT AACAGAAATC TACAACAACA AAGAAATAGC AATAATATTT TTCCATTATC TACTTGGAAT TAACGAAGAG TTTAAGAATA TCTACATTCA AAAAATCTCA GATTTACAAA AACTTTTAGC AAAAATCATA GAAAAAGACC TGCCAGGTCA GGACTCTTTT GTCGTTTCCA ATCTTATCAT TGGATACATT AGACAGCTTA TTTTTAACTG TTTACTTATG AAAAATGAAA GTTTAGAGAA ATTAAAGGAA AGGTTAGACC AGGGCTTAAA TATAATATTC AAAGGCATAA AATAA
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Protein sequence | MSTKDKIILA AKELFSTKGY HETKVSDIVE KAGVAQGTFY LYFKSKEDLF LELIKTLHRR LMEDLEKYYH KEDSFEVKIK NLLEDFITEI YNNKEIAIIF FHYLLGINEE FKNIYIQKIS DLQKLLAKII EKDLPGQDSF VVSNLIIGYI RQLIFNCLLM KNESLEKLKE RLDQGLNIIF KGIK
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