| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1379 |
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| Symbol | |
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| ID | 6331687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1417464 |
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| End bp | 1418588 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657661 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001931540 |
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| Protein GI | 188997289 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA GTATAGGTCT TTTTGTTGTC TTAGTTTTAA TTCTTATTTT TACAGTTTTT
GCCTTCACAT GGATAGAACA CAGAATGAAG TATGTAATAT CAGATGCTGT TTTTGTTGAG
ACTGATTATT TGTCTAATGT AGGATTCAAC AGAGTAAGCG GGAAAATCAT CCAGCTGTAC
AAAAAAGAAG GCGACGCAGT AAAAGCAGAT GAAACAATAG CTAAAATAGA TGACACAGAT
TACAAAATCC AACTTGAAAA TATAAACTAT GAGATAGAAA GTCTAAAAAA ACAAAAATCA
CAATTAGAAA ATCAGCTTTC AAGAATCATA CACGAAAATG AATTAAATCA AAAAATTACA
AGCTTAACCA CGCAGGAGAT TGAGAAAAAA ATAGAGAGCC TAAGCGCACA AAAATCTCAA
GCAGAAGCAC AGATTGAAAA AGCTAAAAAA GATGAAGAAA GATATAGAAA CCTTTTAGAA
AAAGGGCTTG TCCCAAAGGC TAAGTATGAA GAGATAAACA CACAGCTAAA AGTGTTATTA
GACCAGAGAA AAGCAATAGA AAAATCTATC TCAGAACTTA ATGTATCAAA GGCTAAATCT
AAAGAGAGTG TAGAGCTTGT AAAAACACAA GGACAGGTAA GTAAAGAAAT CCAAGACCAA
ATCTCAGCAC TTGAAAATAA GATTTTAGCA CTTACAAAAC AAAAAGAAGA TTTAGAAAAT
CAAATAAAAT ACACAGAGCT TAAATCTCCG TACAATGGCA TCATTGCTAA AAAGTACGTA
TCCATTGGTG ATATTGTAAA AGCCGGACAG CCGATTTATG CAATAGTCAA AGAAAATAGC
TTTTATATAA AAGTTTTACT TGAAGAGACT AAGCTAAGCG GTGTAAAGGT TGGCAACAAA
GCATACATAA AGTTGGACGC ATATCCTGAC AAAACCTTTG AAGGTGAGGT GGAAAGTATA
GATATTTCAT CTGCTGCAAA GTTTGCACTT GTTCCAAGGG ATATATCAGC AGGAGAGTTT
ACTAAATTGG CACAAAGGAT ACCGGTGAAA ATAAGAATAA CAAAAGGGGA TATAAGCCTT
TTAAGAGTTG GCTTAGGCGG AGAGGTAGAG ATTGAGAAAA AGTGA
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| Protein sequence | MKKSIGLFVV LVLILIFTVF AFTWIEHRMK YVISDAVFVE TDYLSNVGFN RVSGKIIQLY
KKEGDAVKAD ETIAKIDDTD YKIQLENINY EIESLKKQKS QLENQLSRII HENELNQKIT
SLTTQEIEKK IESLSAQKSQ AEAQIEKAKK DEERYRNLLE KGLVPKAKYE EINTQLKVLL
DQRKAIEKSI SELNVSKAKS KESVELVKTQ GQVSKEIQDQ ISALENKILA LTKQKEDLEN
QIKYTELKSP YNGIIAKKYV SIGDIVKAGQ PIYAIVKENS FYIKVLLEET KLSGVKVGNK
AYIKLDAYPD KTFEGEVESI DISSAAKFAL VPRDISAGEF TKLAQRIPVK IRITKGDISL
LRVGLGGEVE IEKK
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