| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1368 |
|---|
| Symbol | |
|---|
| ID | 6332617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1404469 |
|---|
| End bp | 1405302 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642657650 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001931529 |
|---|
| Protein GI | 188997278 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTA AGAAAGAAAG ACTTTTAGTT ATATCCTTAG CATTATCTTT ATTAATCCAT
GCGCTGCTTT TTAGCTCATT TTTTCTGCTT AAACCAAAGC CAAAAGAAGA AAAAGAAAAA
ATAATCACAG TGAGTCTTGA TGAAGACTTT AAAAAAGAGT TTAAACCACC GGTAGAAGAA
AAAAAGATGA TACAGAAAAA TGAAGCATTA CCGCAAACTA AATCCTTACC AAAGGTAGAA
GAAAAAAAGA TAGTGCAGCA AAAAGAAACA TTACCACCAC CGCAACCTGC ACCAAAGCCA
CAGCCGGAAA AACCTAAACC TATCGTCAAA CCAGAATCAG AAACGCCAAA ACAAGAAGCT
CAAAAACCGC AAGAAAAACA AAACACTCAA CAACCTATAA AACAAAATCC ACCACAAACT
CAACCAACTC AACAAACACA ACCTACCACA GCACAGACAC AAAAAACAGA ACCAACGCCG
ATAGACTTAT CAAAAGGAAG ACCAGACCAA TTTAAACAAC CGGAAAAAAA GGAAGAAGAT
ATAGACGGCT ACCTTAAAGA ATTGATAAGA TATCTAAATC AGCAGGCAAG AGAGAGAGAT
TTATATCCAC CAATTGCTAA AAGATTAAAA ATAGAAGGTC AAGTAATTGT AAGGGTAACT
ATAAATGAAG ATGGAACAAT AGACGAAAAC TCTATAAAAA TAGTAGAATC AAGCGGATAT
AACGTTCTTG ACAGAGGAGC CATTGAGATT TTAAAGAAAT TACAACCATA CAAAAAACCG
CCAAAGAGAA TAACAGTAGA AATCCCGATA GTATTTCAGA TTATTTATAT GTAG
|
|---|
| Protein sequence | MNFKKERLLV ISLALSLLIH ALLFSSFFLL KPKPKEEKEK IITVSLDEDF KKEFKPPVEE
KKMIQKNEAL PQTKSLPKVE EKKIVQQKET LPPPQPAPKP QPEKPKPIVK PESETPKQEA
QKPQEKQNTQ QPIKQNPPQT QPTQQTQPTT AQTQKTEPTP IDLSKGRPDQ FKQPEKKEED
IDGYLKELIR YLNQQARERD LYPPIAKRLK IEGQVIVRVT INEDGTIDEN SIKIVESSGY
NVLDRGAIEI LKKLQPYKKP PKRITVEIPI VFQIIYM
|
|---|
| |