Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1368 |
Symbol | |
ID | 6332617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1404469 |
End bp | 1405302 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657650 |
Product | TonB family protein |
Protein accession | YP_001931529 |
Protein GI | 188997278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTA AGAAAGAAAG ACTTTTAGTT ATATCCTTAG CATTATCTTT ATTAATCCAT GCGCTGCTTT TTAGCTCATT TTTTCTGCTT AAACCAAAGC CAAAAGAAGA AAAAGAAAAA ATAATCACAG TGAGTCTTGA TGAAGACTTT AAAAAAGAGT TTAAACCACC GGTAGAAGAA AAAAAGATGA TACAGAAAAA TGAAGCATTA CCGCAAACTA AATCCTTACC AAAGGTAGAA GAAAAAAAGA TAGTGCAGCA AAAAGAAACA TTACCACCAC CGCAACCTGC ACCAAAGCCA CAGCCGGAAA AACCTAAACC TATCGTCAAA CCAGAATCAG AAACGCCAAA ACAAGAAGCT CAAAAACCGC AAGAAAAACA AAACACTCAA CAACCTATAA AACAAAATCC ACCACAAACT CAACCAACTC AACAAACACA ACCTACCACA GCACAGACAC AAAAAACAGA ACCAACGCCG ATAGACTTAT CAAAAGGAAG ACCAGACCAA TTTAAACAAC CGGAAAAAAA GGAAGAAGAT ATAGACGGCT ACCTTAAAGA ATTGATAAGA TATCTAAATC AGCAGGCAAG AGAGAGAGAT TTATATCCAC CAATTGCTAA AAGATTAAAA ATAGAAGGTC AAGTAATTGT AAGGGTAACT ATAAATGAAG ATGGAACAAT AGACGAAAAC TCTATAAAAA TAGTAGAATC AAGCGGATAT AACGTTCTTG ACAGAGGAGC CATTGAGATT TTAAAGAAAT TACAACCATA CAAAAAACCG CCAAAGAGAA TAACAGTAGA AATCCCGATA GTATTTCAGA TTATTTATAT GTAG
|
Protein sequence | MNFKKERLLV ISLALSLLIH ALLFSSFFLL KPKPKEEKEK IITVSLDEDF KKEFKPPVEE KKMIQKNEAL PQTKSLPKVE EKKIVQQKET LPPPQPAPKP QPEKPKPIVK PESETPKQEA QKPQEKQNTQ QPIKQNPPQT QPTQQTQPTT AQTQKTEPTP IDLSKGRPDQ FKQPEKKEED IDGYLKELIR YLNQQARERD LYPPIAKRLK IEGQVIVRVT INEDGTIDEN SIKIVESSGY NVLDRGAIEI LKKLQPYKKP PKRITVEIPI VFQIIYM
|
| |