Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1359 |
Symbol | |
ID | 6331135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1395355 |
End bp | 1396200 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657642 |
Product | UspA domain protein |
Protein accession | YP_001931521 |
Protein GI | 188997270 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGCA GAATTCTTGT TGGATTAGAT GGTTCAAAAA TTAGTAAAGT AGCAGGAGAA TACGGAATTT ATCTGTCAAA AAAATTAAAA AGACCGGTTG TAGGTATTCA TATCATTGAT ATAAGACTAT TAGAAGGACC TTTCTTATCA GATATAGCAG GCGGTCTTGG TTTTACTGTT TACGGAGATT TAACAGCTAA AATAAAAGAA GTTCTTGATG CAAAAGCAGA TGCAATTTTA GATGAATTTG CTGTAAGATG TAGAGAAGAA GGCGGTGATT GTTCTATTGC ATCAGCTTAT GGCGTGGTTG TAGATGAGCT TATTAACATG GCTGACCCGG AGGATATATT GATAGTTGGA AAGAAAGGTG AGCATGCAGG ATTTGCTCCA CTTTTCCTTG GCTCTACAGC TGAAGCAGTA GCAAGAAAAG CACACTGCCC AGTGATGGTA ACACCACCAG AATTTAGAGA AATAAAAAAT ATTTTACTTG CATTTGATGG AAGAGAAAAA TCAGTCCATG CTGCAATCTA TGTAAACTAT TTAGCAAAAA CATTACAAAC AAATGTAAAA GTTATCTCTG TGTTTAAGGA TAAAGTAGAA GACCAACCAT TAGCAGAAAG CTTTAAAGAA AGGCTTGAGT CTATTCTTGA AGTTCCGTTT GAATTCATTG ATAAATACGG CTTACCGGAA GATGTATTAG ATGAATACAT AACCACAAAT AAAGACAATC TTGACCTTAT TGTAATGGGT GCGTTTGGTG AAAGTGTCGT TAAAGAGCTT ATTCTTGGAA GTACAACAAA CTATATAATG TCAAGGTCTC CTGTCCCCGT ATTGCTTGTT AAGTAA
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Protein sequence | MIGRILVGLD GSKISKVAGE YGIYLSKKLK RPVVGIHIID IRLLEGPFLS DIAGGLGFTV YGDLTAKIKE VLDAKADAIL DEFAVRCREE GGDCSIASAY GVVVDELINM ADPEDILIVG KKGEHAGFAP LFLGSTAEAV ARKAHCPVMV TPPEFREIKN ILLAFDGREK SVHAAIYVNY LAKTLQTNVK VISVFKDKVE DQPLAESFKE RLESILEVPF EFIDKYGLPE DVLDEYITTN KDNLDLIVMG AFGESVVKEL ILGSTTNYIM SRSPVPVLLV K
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