Gene SYO3AOP1_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1317 
Symbol 
ID6332634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1355554 
End bp1355892 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content28% 
IMG OID642657601 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001931481 
Protein GI188997230 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA TAATCTACAA ACATAATTTT AATACCAAAT TTTCTGATGA AAAGGTTGTC 
ATAGAAAAAG TAGCAGATAC TCAAAATGCA AGAATTTTAC TATTCTTTTT AAAGAAAGGT
CAGATTGTAA ATTTACATCA ATCACCATCT GATGTTATTT TAACTGTTTT AGAAGGTAAT
GGAAGGTTTT TTATTGGAAG TAAAGAAGAA TACAGAGATT TAAGTACAGG AGAAACCATA
ATTTACGAGC CTAATGAACC TCATGGATTT GAAGCATTAG AAAATTTAGT TGTACAAGCT
ATAATTACAC CTATTCCAAC TAAAAAGATT AGCTTGTAA
 
Protein sequence
MSLIIYKHNF NTKFSDEKVV IEKVADTQNA RILLFFLKKG QIVNLHQSPS DVILTVLEGN 
GRFFIGSKEE YRDLSTGETI IYEPNEPHGF EALENLVVQA IITPIPTKKI SL