| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1297 |
|---|
| Symbol | |
|---|
| ID | 6331911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1335637 |
|---|
| End bp | 1336848 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642657581 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_001931461 |
|---|
| Protein GI | 188997210 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.216598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA GAATATATGT AGACCATTTA GCAACAACGC CAGTTTGCGA TGAAGCCATA
GAAGCAATGA TGCCTTATTT TAAAGAAAAG TTTGGTAACC CAACATCTCT TCATGAAATG
GGAATAGAAG CAAAAAAAGC TATAAACAGA GCAAGGGAGC AAGTAGCACA ACTTTTAAAT
GTATCAAATC CGGAAGATAT AGTTTTTACT TCAGGAGCTA TAGAGGCCAA TAACCTTGCA
ATAAAAGGAT ATGCAAAAGC GCCTGGAAGA AGAGGAAAAC ATATCGTTGT TTCTGCGATA
GAGCACCACT CTATATTGCA TTCTTGTAAA ACACTTGAAA AAGAAGGATT TGAAATTACA
GAAGTTCAGC CTGACGAGTA TGGAATCATA GACCCAGAAA AATTAGCCGC TGCTGTTAGA
GAAGATACTA TTCTTGTATC TGTTGGATTT GCAAACAGAG AAATAGGAAC CCTTCAAGAT
ATGCCAGCAT TGGTTGCTGC AGTGAAAGAA AAAAATCCAA GAGTAGTTTT CCATTCAGAT
ATAGCTGCTG CTGTTGGCCA TATGCCTGTT GATGTTGAAG GATGGGGTCT TGATATGGCT
TCATTTACAG GTCATTACTT TTATGCTCCA AAAGGTGTAG GTGGATTGTA TGTTAAAAAA
GGAATTAGAT TAAAACCACT TATAGAAGGT GGAATACAAG AAGGTGGAAG AAGAGCAGGA
ACAGAAAACG TAGCTGGAAT TGTAGGAATG GGTGCAGCAG CTGAACTTGC AATAAAAGAA
ATGGATGACA GAGTAAACAG ATTAAGATAC TTAAGAGATA AACTTAAAAA AGGTATTGAA
GAAAGAATAC CTTACATAAG ATTTACAGGT CATCCGGAAA AAAGACTTCC CAACCATCTT
TCGTTGATTG TTATGTATAT TGAAGGTGAA GCAATGCTTT TAATGTTAAA TATTAAAAAG
ACATACACAG CTTCAGGGTC TGCTTGTGTA TCTTATGCGT TAAAACAGTC TCACGTTTTA
GCAGCAATAG GAGTAGAAAA GGAAGCATCA AACGGTTCTA TCGTTTTCTC TCTTGGAAGA
GATAATACAG AAGAGGACAT AGATTATATT ATTGAAGAAT ATCCAAAGGT AATTGCAAGA
CTTAGAGAGA TATCTCCATT TAACCCAGAA AACTGGGAAG AGTTTACAAA AAAAGCATCA
AAGTTTAAGT AA
|
|---|
| Protein sequence | MNRRIYVDHL ATTPVCDEAI EAMMPYFKEK FGNPTSLHEM GIEAKKAINR AREQVAQLLN
VSNPEDIVFT SGAIEANNLA IKGYAKAPGR RGKHIVVSAI EHHSILHSCK TLEKEGFEIT
EVQPDEYGII DPEKLAAAVR EDTILVSVGF ANREIGTLQD MPALVAAVKE KNPRVVFHSD
IAAAVGHMPV DVEGWGLDMA SFTGHYFYAP KGVGGLYVKK GIRLKPLIEG GIQEGGRRAG
TENVAGIVGM GAAAELAIKE MDDRVNRLRY LRDKLKKGIE ERIPYIRFTG HPEKRLPNHL
SLIVMYIEGE AMLLMLNIKK TYTASGSACV SYALKQSHVL AAIGVEKEAS NGSIVFSLGR
DNTEEDIDYI IEEYPKVIAR LREISPFNPE NWEEFTKKAS KFK
|
|---|
| |