Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1274 |
Symbol | |
ID | 6332643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1316276 |
End bp | 1317652 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657559 |
Product | amino acid permease-associated region |
Protein accession | YP_001931439 |
Protein GI | 188997188 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTC TAAGGAAAAA AGAATATAAA CAAGTAGAAA CCAAATTAAA AAGAAGTTTG GGCTTTTGGG ATTTAGTTTT TATTGGAGTT GGTGGAATTA TAGGTGCAGG TATTTTTGTA ATCACGGGAC AAGCGGCAGC AAGTTATGCA GGACCTGCAA TTGTTTTATC TTTCATTTTT TCTGCTATTG CTATAGGAAT TACAGCTCTT GTCTATGCAG AATTTAGCTC ATCTTTTCCA GTTTCTGGAA GTGCTTACAG TTATACATAT GCCACACTTG GAGAGATTAT AGCTTGGCTT GTTGCTTGGA ATATTTTACT GGAGTATGGA GTTGCTACTG CGGCGGTTGC TACAGGTTGG TCTGGATATC TACGAACCTT TTTAGAAAAA AACTTTGGAT TTACTCTACC GGTTGAACTA ACAGGTGCTT TTGATCCAAG TAAAGGAACT GTTATTGACC TATTTGCTTT CTTAGGTGTT ATCGGTGTTT TTGTTTTACT GACAATTGGA ATTAAAGAAA GTGCAAAAGT AAACTCTGCA ATAGTAATAC TTAAATTAGC AATTTTGATT GCTTTTATCA TTGTTGGAAT TAAGTATGTA AAATTAGAAA ATATCACTTC TGACTTTTTA CCATACGGAT GGAAAGGTGT TTGGACTGCA GCGTCTTTAA TAGTTTTTGC ATATCTTGGA TTTGATGCTA TCTCTACATT GGCAGAAGAG ACAAAAGACC CACAAAAAAC CATGCCAAAA GGCTTAATAA CAGCTCTTGG AATTAGTACT GTTTTATATA TAGCTGTCTC TTTTGTACTG GTAGGAATGC TTAATTATAA ATCTTATGAA GGAAAGCCTG ATTCTCTTGC CTATGCTATG TATCAAGTAA ATGAAAAATG GGTTGCTGAC TTTATTTCTA TTGGTGCGGT CATAACCATT ACAAGTGTAA TGATTGTTAT GGGACTTGGT TTTACAAGAG TTATGTATGC ATTATCAAGA GACGCACTTT TCTTTAAAAC TTTTTCGGAT GTTCACCCTA AATTTGGGAC TCCGTATAAA GCTTCTATTG TTGGTGGTTT ATTTTTATCT ATATTGGCTG GAATTTTGCC TTTAAAAGTT TTAGCAGAGC TTGTAAATAT TGGGACATTA TTTGCATATT TCATGGTAGG AATTGCAGCA ATAGTTGTTA GAAAGGATTC AAACTATAAT CCATTATTCA AAGTTCCTGC CCCGAATTTA CTCCTTCCTT TAAACGTTGT ATTCTTGCTT TTAATAATGG CAGGTTTACC AATGGATACG TGGTTAAGAT TTTTTATATG GAGTTTTATC GGATTGCTTA TTTATGCTTT ATACGGATTT AAAAATAGTA ATTTAGGTGG AAGGTGA
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Protein sequence | MEFLRKKEYK QVETKLKRSL GFWDLVFIGV GGIIGAGIFV ITGQAAASYA GPAIVLSFIF SAIAIGITAL VYAEFSSSFP VSGSAYSYTY ATLGEIIAWL VAWNILLEYG VATAAVATGW SGYLRTFLEK NFGFTLPVEL TGAFDPSKGT VIDLFAFLGV IGVFVLLTIG IKESAKVNSA IVILKLAILI AFIIVGIKYV KLENITSDFL PYGWKGVWTA ASLIVFAYLG FDAISTLAEE TKDPQKTMPK GLITALGIST VLYIAVSFVL VGMLNYKSYE GKPDSLAYAM YQVNEKWVAD FISIGAVITI TSVMIVMGLG FTRVMYALSR DALFFKTFSD VHPKFGTPYK ASIVGGLFLS ILAGILPLKV LAELVNIGTL FAYFMVGIAA IVVRKDSNYN PLFKVPAPNL LLPLNVVFLL LIMAGLPMDT WLRFFIWSFI GLLIYALYGF KNSNLGGR
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