| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1273 |
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| Symbol | |
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| ID | 6332642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1315569 |
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| End bp | 1316216 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657558 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001931438 |
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| Protein GI | 188997187 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACTTAA AAACATTTGA AAAAGCTTTT AAAATACTAA AAAAAGAAAG TAAAAATTGG
AATGCACCTG TAGTTGCATT TATGGGTAGA AATGGAAATG ACCCATTTAA AATATTGATT
TCTACCATTT TAAGCCTTAG AACAAAAGAC CAAATAACAG CTCAAGCAAG TGATAGACTT
TTTAAAGTTG CAGATACACC AGAAAAAATT TTAAAACTAT CTGAAAAAGA AATAGTAAAA
TTAATCTATC CAGTAGGATT TTATAGAAAT AAAGCAAAGA TTATAAAAGA GATTTCAAAA
ATACTTGTTG AAAAATTTAA TTCTAAGGTC CCTGACGATT TAGAAACGCT TTTGTCTTTC
AAAGGTGTTG GAAGAAAAAC CGCAAATTTA GTTTTATCGG AAGGTTTTGG AAAACCTGCT
ATATGTGTAG ATGTTCATGT TCACAGAATA TCAAACAGGA TTGGCTTAGT AAAAACCAAA
AATCCAGAAG AGACCGAGTT TAAGCTGATG AAGATATTAC CTAAAAAATA TTGGAAAGAT
ATAAATTTTG TTCTCGTTGC CTTCGGACAA ACCATTTGTA AGCCTGTTAA ACCTAAGTGT
AAAGAATGTC CGATTGTAAA GTACTGTGAA CATGATAAAA AGAGTTAA
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| Protein sequence | MDLKTFEKAF KILKKESKNW NAPVVAFMGR NGNDPFKILI STILSLRTKD QITAQASDRL
FKVADTPEKI LKLSEKEIVK LIYPVGFYRN KAKIIKEISK ILVEKFNSKV PDDLETLLSF
KGVGRKTANL VLSEGFGKPA ICVDVHVHRI SNRIGLVKTK NPEETEFKLM KILPKKYWKD
INFVLVAFGQ TICKPVKPKC KECPIVKYCE HDKKS
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