Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1232 |
Symbol | |
ID | 6332523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1280314 |
End bp | 1280661 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642657516 |
Product | Heavy metal transport/detoxification protein |
Protein accession | YP_001931397 |
Protein GI | 188997146 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0066446 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT TTACGATGCT TAGTATATCA TTAGCTTTAA TTGGTGGTAT TAGTTGGTTC TTTTTTGGAA AGAAGTCTAA TCAAGAAAAA AATGAAAGTT TATCCGATGA GTTAGAAACT ATACAACTTA ATATCTCAGG AATGCATTGT GCAGGCTGTG CAGCTGGAAT AGAAGCAACG TTAAAAATGA TTGATGGAGT TAAAGAAGCT TCTGTAAACT TTGCTACTTC AAAAGGTGTT TTCACATTTG ACCCAACTAA AATAACCAAA CAGCAAATAG TGGATAAAAT AAAAGAACTT GGATACGATG CTTCCTTTGA TTTAGAAAAT TTTGAAAAAA AAAGTTAG
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Protein sequence | MKDFTMLSIS LALIGGISWF FFGKKSNQEK NESLSDELET IQLNISGMHC AGCAAGIEAT LKMIDGVKEA SVNFATSKGV FTFDPTKITK QQIVDKIKEL GYDASFDLEN FEKKS
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