| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1149 |
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| Symbol | |
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| ID | 6331613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1197139 |
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| End bp | 1198836 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657431 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_001931315 |
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| Protein GI | 188997064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 80 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGT TTGAAAAAAT GATGGAGCAA GCTGTAGAAG CATCTCGTTA CTCAAAAAAT
CAAAAAGTAA AAGGAAAAAT CGTAAAAATA ACAGATGATA AAGTCTATGT AGATATTGGA
CAAAAAGTAG AAGCTGTTTT AAGAAAACAA GAAGCAGAAG GCTACAAAGA AGGTGATGAG
ATAGAGGCAG TATTTATTGG CAAAAGAGAT AAAGACGGAT ACTTTATCCT GTCAAGAAAA
GGCTTTGTCA TGAAAGATAA GGTAAAGAAG CTTAAAGAGG CTTTTGAAAA TAAACAAAAA
GTAAAAGTTA TGGTAGTTAG TAAAGGAGAA AAAGGATATA TTGTTGATAT AGAAGGCATT
AAAGGATTTA TGCCATTTTC AGAGTCCGGC ACCAAAAGAG ATGAAACTTT GCCTGAAGGT
TATACGTTTG AAGGATACAT TGTTAAGTTT GAAGAAAGAA AAGGCAGTCC TAACGTTGTA
ATATCAAGAA AAGAAGCATT AAAAGAAGAA GTAAACGCAG AAAAAGAAAA ATACTTATCA
GTTTTACAGC AAGGTCAAAA AGTTATCGGC AAGGTAGAAA AAATCACCGA TAAAGTTGCT
GTAATCTCTA TTGATAATGT AGTTTATGGA ATCCTGCCAA AGAGTGAACT TTCTTGGGAT
AAAAACAAAA AGTTTGAAGA TGTTTTAAAA GTAGGAGATA GCATAGAATT AGTAATAAAA
GAAATTAAAG ATAAAAAGCC CATATTTTCT TTAAAAGCTT TAGAGCCAAA TCCATGGGAT
AAGTTTGATA AAGATGTTGA GGATGTTGTA GAAGCTACTG TTAAAGAAAT CAATAAATTT
GGTGTAATTG TTGATGTAGA TGGAGTTGAT GGTTTTATCC ATAACAGAGA AATTTCACAT
TTTGATTATA TGAAAGCTAA GAAAAATTTA AAAGTTGGTA ATAAAGTTAA GGCAAAAATT
ATAGAGCTTG ATAAAGAAAA CAGAAAATTA AAATTAAGCA TAAAAGCATT ACAAGAAAAT
CCAGTAGAAA AATTCTTAAA AGAAAATCCT GTTGGTAGTG TAATTGAGGC AAAAGTTAAA
GATGCTAAGC AAAAAGTTGC ATTTATAGAC CTTGGTGAAA TAGAGGGAAT CGTAAAACTT
GAAGATGCTA CAGATAATAA AAATATTAAG TCTATCTCAT CAGTACTAAA GGAAGATAAA
GTTTATAAAT TTAAAGTCCT TGGTGTGGAA AAAGACAAAA TCTTACTTGG AATAAAACAG
CTCTTAGAAG AAGATTGGAA TGAGTTTATC TCTAAATACA AAGTTGGCGA TGTTGTTAAA
GGAAAGGTCA AGAAACTTAT AGAAAAAGGT GCAATTGTTG ATTTGGGAGA AAATATAGAA
GGCTTTATAC CAGTTTCTGA AATAGCATTA GAAAGAATAA ACATTCCAAG CGATAAGTTA
GAGCTTCATC AAGAAGTCGA GGCTAAAATA ATAAAAATAG ACCCAGAAAA CAAGAAAATA
ACATTAAGCA TTAAACAAAT TTTATTAGAT GAAGAGAAAA GAAAAAAAGA AGAAGAGAAA
AGAAAAGCTG AAGAAGAGGC AAAAAGAAAG CTTTTAGAAA AATTAGAGAG TAAAAAAGAA
GAAACAAAAC AACCAGAAGG GGAAAGCTTA GGTACCCTGG GAGATATTCT TAAGAAAAAG
CTACTGGAGA AAGGTTAA
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| Protein sequence | MNEFEKMMEQ AVEASRYSKN QKVKGKIVKI TDDKVYVDIG QKVEAVLRKQ EAEGYKEGDE
IEAVFIGKRD KDGYFILSRK GFVMKDKVKK LKEAFENKQK VKVMVVSKGE KGYIVDIEGI
KGFMPFSESG TKRDETLPEG YTFEGYIVKF EERKGSPNVV ISRKEALKEE VNAEKEKYLS
VLQQGQKVIG KVEKITDKVA VISIDNVVYG ILPKSELSWD KNKKFEDVLK VGDSIELVIK
EIKDKKPIFS LKALEPNPWD KFDKDVEDVV EATVKEINKF GVIVDVDGVD GFIHNREISH
FDYMKAKKNL KVGNKVKAKI IELDKENRKL KLSIKALQEN PVEKFLKENP VGSVIEAKVK
DAKQKVAFID LGEIEGIVKL EDATDNKNIK SISSVLKEDK VYKFKVLGVE KDKILLGIKQ
LLEEDWNEFI SKYKVGDVVK GKVKKLIEKG AIVDLGENIE GFIPVSEIAL ERINIPSDKL
ELHQEVEAKI IKIDPENKKI TLSIKQILLD EEKRKKEEEK RKAEEEAKRK LLEKLESKKE
ETKQPEGESL GTLGDILKKK LLEKG
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