| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1134 |
|---|
| Symbol | |
|---|
| ID | 6332342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1184425 |
|---|
| End bp | 1185354 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642657417 |
|---|
| Product | Rubrerythrin |
|---|
| Protein accession | YP_001931302 |
|---|
| Protein GI | 188997051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000119671 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA TAGAAAGAGA AAAAATAATA AATTACTTTA ACTACAATAT AGCCTTAGAG
CATAGTGCAA TCATTCAGTA TTTATTTCAT GCCTACACAA TTGGAGAGGC TGAAACGGAA
AATGAAATTG AAGAAATAGC AAGAGAAGAG ATGAGACATC TAAGAATGTT TGCTCATAAA
GTTGTTGAAC TTGGTGGAGA CCCTGCAATT TCTGAAAGAG CAGCAGTATT TTTACATGCA
CCAACCTTAG AAGAACTAAT GCAGCTTAAC ATTGATGCAG AACTAATGGC TATTAAAGAA
TATTCAAACC AATTAAATGA TATAAATGAT GAACCAAACA AAAGAATTCT TTCAAGAGTC
ATAAATGATG AAACAGCACA CAGTCATATT TTTATGAAAA TGAAAGAGAA TTTAAAACAA
TTAATCAAAT CATCTTCTTC ACAAGCCGAG CAAGAAAGAA TGGAAATAGC ACAGTTATTA
AATACAGTAC TACAAAAACA ATACAAAAAG ATTTTAGAAG AGCTTTACCA ATCATTCATA
ACAAGATTTA AGAATCCACA CTTAAGCGAC GAATTAGAAC AAAAAGCGAT AGATAAAATG
AAACACTTTG GCTGGATAGC CGAAGAGCTA ACAGAGAATG GATTAGAAAT TGACGTATCT
TTACCAAAAG TTGAAAAAAT AAATCAAATT AATCAAATAG TAGAATACAA TGTCCAAGAA
GAAAATATAT CTTCACAGGA GTTTAAAGAA CTTTCAGAAA AAACCAAAGA AGAAAGTTTA
AAATGGATTT TAGAAAGGAT CTCAAAAAGA GAAATACATT ACAAAGATTT AAAAGCCTTC
TTAGAAAGAA GCGACCTTAC AGAAAAAGAA CATTCTAAGA TAATATCAGC TTTTACTGTT
GGCAGTTTAT TTAAAAAAGG AGCTAAATAG
|
|---|
| Protein sequence | MKDIEREKII NYFNYNIALE HSAIIQYLFH AYTIGEAETE NEIEEIAREE MRHLRMFAHK
VVELGGDPAI SERAAVFLHA PTLEELMQLN IDAELMAIKE YSNQLNDIND EPNKRILSRV
INDETAHSHI FMKMKENLKQ LIKSSSSQAE QERMEIAQLL NTVLQKQYKK ILEELYQSFI
TRFKNPHLSD ELEQKAIDKM KHFGWIAEEL TENGLEIDVS LPKVEKINQI NQIVEYNVQE
ENISSQEFKE LSEKTKEESL KWILERISKR EIHYKDLKAF LERSDLTEKE HSKIISAFTV
GSLFKKGAK
|
|---|
| |