| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1133 |
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| Symbol | |
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| ID | 6332341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1182866 |
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| End bp | 1184041 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657416 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001931301 |
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| Protein GI | 188997050 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0793831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAA GTAAAAAGAT TTTTATTTTT GTAGTTTTGA TAGTCATCTT AATTGCTGTT
TTTTCTGTCA TTAGAAAGAA ACGAGAGTTG GCAAGCTTTG AAAAACCTAA AAGCTATCCG
TTGGTAGTAA ATACATCTAA CGTAAAACAA GGAGAGCTTG AATCTTATCA AAAATTCTTA
GGTGAGTTTA GACCAGAAAA TGATGCTCTT GTAAGTTCAA AGTTTAGTGC AACGGTTTTA
TATGTTGCAA ATGAAGGGAC AAAGGTTAAA AAAGGAGATT TGGTTTTTAA GTTGGATTCC
AGTGATATAG AATCAAACAT ATCAGCTTTG ACGTACTCTC AAAAAGCTAT TTTAGACCAA
ATAGATAGTG CAAAAGCTCA GATTGAAGCA TCAAATACAC AGTATATAAA TGCCAAAAAA
GAGTATGAAA GATATAAAGG GCTTTATGAA AAAGAGCTTA TTTCTAAAGA ACAGTTAGAA
AATATGGAAA ATCTATATAA ACAAGCTTTG GCCAATAAAG AAAATGCTTT AAGTAAAGTA
AAACAGTTAG AAGACCAAGC TAAATCTGTA GCCGGTCAAA TAGAGTCTTT AAAATCTAAT
CTAAATTACA CAGAATACAG AGCTCCTTTT GATGGAGTTG TGGCAAGTAA ATTTGTTAAT
GTTGGAGATG TGGCTTTGGC TGGTAAGCCG GTAGTTGAGA TTGTAGGAAG TGGGAAATAC
TTAGTTTATG TCAACGTGCC AACTGAATTA GCTTTAAAAG TAAAGAAAGG AGATGTAGAG
AAAGTTAGCT ATAACGGCCA GTCTGTCGAT GTTGTTGTGG AAGATGTTTT ACAATCTGCT
CAAAATAATC TATCAATCCT AAAACTTTCT GTTTCAAATA ATCCTTTCAA TCTGCCTGCT
CATACATTCG TTGACGTTTT TATTAAAGAA GGTAGATGTG ATGGCTTTAT AGTCCATGCT
AATTCTGTAG TAAAAAAAAT AGATGGTTAT TATGTGATAG GAATAAAAGA CTCAAAGGCT
CATTTAGTTC CTGTTGTAGT GAAAGCTAAA ACATTAACTG AGGCATGCGT TGATGGTAAT
TTAAGCACAA TAGATAAAGT AGTTGTCGGA GATGAGTCTT TGCTACAAAG AATTTATGAA
GGTCAAAAGC TTATTGAGTT TAGAGGTGAA AACTGA
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| Protein sequence | MGKSKKIFIF VVLIVILIAV FSVIRKKREL ASFEKPKSYP LVVNTSNVKQ GELESYQKFL
GEFRPENDAL VSSKFSATVL YVANEGTKVK KGDLVFKLDS SDIESNISAL TYSQKAILDQ
IDSAKAQIEA SNTQYINAKK EYERYKGLYE KELISKEQLE NMENLYKQAL ANKENALSKV
KQLEDQAKSV AGQIESLKSN LNYTEYRAPF DGVVASKFVN VGDVALAGKP VVEIVGSGKY
LVYVNVPTEL ALKVKKGDVE KVSYNGQSVD VVVEDVLQSA QNNLSILKLS VSNNPFNLPA
HTFVDVFIKE GRCDGFIVHA NSVVKKIDGY YVIGIKDSKA HLVPVVVKAK TLTEACVDGN
LSTIDKVVVG DESLLQRIYE GQKLIEFRGE N
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