Gene SYO3AOP1_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1115 
Symbol 
ID6332484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp1158935 
End bp1159606 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content31% 
IMG OID642657399 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001931284 
Protein GI188997033 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAA AGGGTGCGAA GAAATCTATT GAAAAAGCTT TAGATTTATT AGAAGCTTTG 
AAGGAAAAAG ACAATTTAGG CGTTACTGAA CTTAGTAATA TTCTTGGATT AAATAAAAAT 
AACGTTTTTA GACTCCTTGC AACTTTAGAA GTAAAAGGTT TAATAGAGCA AGACCCAGAA 
ACAGGACATT ACAGACTTGG AGTAAAAACT TTACTTTTAG AATATTCATT TATAAAAAAT 
TTAACAATTT TAAACCAGGC AAAACAGTTT GTTAAACAGC TAAGGAATAA AACAAATGAA 
ACAGTTTACT TGTCATTGAT GCATCAAAAT GATATTGTCT ATTTTTACTC TAAGGATAGT 
AAATCTTCTG TTTTAGTCAA TTCAAGAATT GCTAAAAGAT ATCCTGCTAT TGAAACTGCA 
CCGGGTAGAG CTATTTTAAG GGCAAAAAAA GAGCTTGGTG ATATTTTTGA GTATGATTTC 
GAAGGCTTAG AGCCGGAGGT ATCAGAGATA GCCACAGTTA TAAGAGATGA AAGTGATTAT 
CCAGTTGCCG CACTTTCTAT AGTTGCACCA ATTTCAAGAC TTAATAAATC AAATTATGGC 
GGACTGTTTA AACATGAATT ACTACAAACA GCAAAAGAAA TAACAAATTT GTATAAAATA 
GATTTGCCTT AA
 
Protein sequence
MQKKGAKKSI EKALDLLEAL KEKDNLGVTE LSNILGLNKN NVFRLLATLE VKGLIEQDPE 
TGHYRLGVKT LLLEYSFIKN LTILNQAKQF VKQLRNKTNE TVYLSLMHQN DIVYFYSKDS 
KSSVLVNSRI AKRYPAIETA PGRAILRAKK ELGDIFEYDF EGLEPEVSEI ATVIRDESDY 
PVAALSIVAP ISRLNKSNYG GLFKHELLQT AKEITNLYKI DLP