| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1089 |
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| Symbol | |
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| ID | 6332025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1132557 |
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| End bp | 1133603 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657375 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001931260 |
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| Protein GI | 188997009 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC CAAAAAATGA TTTATTTTTA AGAGCTTGCA GAAGACAAAA AGTAGAAAGA
ACACCAATCT GGCTAATGCG TCAAGCCGGC AGATACATGA AAGAATACAG ACAGTTAAGG
GAAATAGCAG GAAGCTTTAA GAATTATTAT AAAAATGTAG ATTTAGCTGT AAAAGCTTCT
ATTTTACCGT ACACTTTGCT TGGTGTTGAT GCAATAATCA TTTTTTCTGA TATACTTACA
CCACTTGAAT CAATCGGAAT GAAATTTGAT TTTAAAGAAG GAGAAGGACC GGTTTTTGAA
AATCCTATCA AAGGCAAAGA AGACATCCAA AGCCTAAAAG AGTTTAACGC TGAGGATGTT
TATTTTGTTG GAGAAATCAT AAAAGGTGTT AATCAAACTA TCAACAGAGA AATTCCGGTG
ATTGGGTTTG CTGGAGCGCC TTTTACGATA GCAGCATACA TGATAGAAGG CAGAGGTTCA
AAGGACTTTA AAAAAACAAA ATCTTTTATG TATAACAACC AAGAAGATTT TAAAATACTT
CTTGATAAAA TCGCAGATAT GACTATAAAG TATTTAAGCT TTCAGATAGA GTCCGGAGCT
GATGCTGTTC AAATCTTTGA CAGCTGGGCC GGTCATCTTT CACCTAAAGA TTATAAAGAG
TTTGTACTGC CGTCAGTTAA GAAAGTAATA GAAAATCTTA AACATTACAA CAAACCAATC
ATACACTTTA CAAAAGGCGT TTGTGGATTT ATGGACTTTA TTCTCGATTC TAATGCTGAT
GTATACAGTA TAGATTGGAT GATAGACATC AAAAAAGCAA AAGATTTAAT CTATCCAAAG
GCATCTGTTC AAGGAAATTT AGACCCTATG GTGTTGTATG CTGACAAAGA CATTATAAAA
AAAGAAGCAG AGTATATAAT TAAATCATGG GGAGAGGATA CAGGACATAT ATTTAACCTT
GGTCATGGTT TGATGCCGGA TATGGACGCA AGTAAAGTTA AATTTTTAGT TGATACTGTA
AAAGAAATTT CAGTTAGAAG GCGGTAG
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| Protein sequence | MQNPKNDLFL RACRRQKVER TPIWLMRQAG RYMKEYRQLR EIAGSFKNYY KNVDLAVKAS
ILPYTLLGVD AIIIFSDILT PLESIGMKFD FKEGEGPVFE NPIKGKEDIQ SLKEFNAEDV
YFVGEIIKGV NQTINREIPV IGFAGAPFTI AAYMIEGRGS KDFKKTKSFM YNNQEDFKIL
LDKIADMTIK YLSFQIESGA DAVQIFDSWA GHLSPKDYKE FVLPSVKKVI ENLKHYNKPI
IHFTKGVCGF MDFILDSNAD VYSIDWMIDI KKAKDLIYPK ASVQGNLDPM VLYADKDIIK
KEAEYIIKSW GEDTGHIFNL GHGLMPDMDA SKVKFLVDTV KEISVRRR
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