Gene SYO3AOP1_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1034 
Symbol 
ID6330960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1070059 
End bp1070997 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content28% 
IMG OID642657322 
Producthypothetical protein 
Protein accessionYP_001931207 
Protein GI188996956 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAACA AAGAAAGTAT ACAACCTCAC AATTGGTTTT TTAAGCAAGT ATTCTCAAAC 
TCAAAAAACG TCCAAGACTT TCTTAGTATA TTCTTATCTG ACCTATCTCA AAAAATACAG
CTAAGCTCCT TAGAGTTAGT GCCATCAGAA AAATTCTCAA ACAATCAAAA AAAACATTTT
CTTGACCTGC TTTACAAATG TAAACTAAAC GACAAAGAAG CATATATAAG ATTAATATTT
GAACATAAAT CATACGTAGA CAAAAAACTA CCACTTCAAC TTATGCAGTA CAACGCCGTT
ATTTGGGAAG AAGCATTAAA AGAAAAAGAT TACTATCCAC CAATCATAAA CATAGTCTTT
TATCATGGAC AGGCAAAATG GAACTTTCCG ACAACCATTC CAGATATAGA AGATGAAGAG
TTAGACAAAT ACATCCAAAA ACTCAACTAT ATCCTCATAG ACCTAAACGA AATAGAAGAT
GAAAATCTAA AAAGGTACTT AAAGAAAAAT GTTGATTTAA TCATGGAAAT GTTGATAATG
AAGCACATTC ACGATAGGTT AGAAAGGATA AAAACTTTAC TCAAAGATGT AATAGATGAA
TGTTCAGAAG ATTGTTTTGT TATAATTCTT AATTATCTTG TATTAGTAAA AAAAGATTAT
GAAAAAGTCA AAGAAGTTTT TAAAGAGATA ATAGGAGGTG AAGAAAAAAT GATGTTATTC
ACTGATAAAT TAAAAATGGA AGGAAAAATG GAAGGAAAGA TAGAAATTTT AAGAGAGAAT
ATAATAGATT TGATAGATGT AAAGTTTGGA GTAGTTGATA AATCTATAAC AGAAAAAGTT
AATCAAATAG ATAATATAGA AACTCTAAAG CAAATTTTAA GAATAGTTGG AAAAAGTCAA
AGCTTGGATG AAGTAGGAGA AAAGCTAAAT AGTTTATAA
 
Protein sequence
MKNKESIQPH NWFFKQVFSN SKNVQDFLSI FLSDLSQKIQ LSSLELVPSE KFSNNQKKHF 
LDLLYKCKLN DKEAYIRLIF EHKSYVDKKL PLQLMQYNAV IWEEALKEKD YYPPIINIVF
YHGQAKWNFP TTIPDIEDEE LDKYIQKLNY ILIDLNEIED ENLKRYLKKN VDLIMEMLIM
KHIHDRLERI KTLLKDVIDE CSEDCFVIIL NYLVLVKKDY EKVKEVFKEI IGGEEKMMLF
TDKLKMEGKM EGKIEILREN IIDLIDVKFG VVDKSITEKV NQIDNIETLK QILRIVGKSQ
SLDEVGEKLN SL