Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1020 |
Symbol | |
ID | 6332588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1057229 |
End bp | 1057957 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657308 |
Product | protein of unknown function DUF218 |
Protein accession | YP_001931193 |
Protein GI | 188996942 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTTA TAAAGAAGCT AATTACTTTT TTTATTATAC CACCCGGATT GTTTGTTCTT ATATTTCTAA TCATCGCTTA TTTTTCAAGA AATAATAAAA GAGTTTTGAC CATCTCGTTA GCTTCAGCTA TTTCAATTTA TTTAATCTCA ATAGAACCTG TTAAAGATTT TCTTCTAAAA CCTCTTGAGG CAAAATTTCA ACAGCCAAAA AATATAAGTG GAGATGTTAT AGTTGTTTTG GGTGGTGGTA GTTATAATAC TGGAATTCTA ACAGAAGACT CTTTAAAAAG AGTTCTTACA GGTTTTGTTC TTCATAAAAG ATTAAACGTT CCAATTATCT TATCCGGTGG GTCTGCCATT ACAAACTTAC CAGAATCAGA AGCTATGAAA TCTTTATTAG CAGAGCTTGG AATTGATAAA AAAATGATTT TTACAGATGT TCAAAGCAGA GATACATTAG AAAATGCATT TTTTACAAAG AAAATCTGTA AAAAGTATGG ATACAAGACT GTTATTTTAG TTACTTCTGC TTATCATATG CCAAGGTCTT ACATGACTTT TAAGCAGGCA GGATTGAATG TAATTCCATA TCCAACAGAT TTTAAGATGG ATAAAAAGTA TACAGTTTAT AGCTACTTTC CGAAAATGAA CGTTCTTCAA GATTCAACAA AAGCAATCAG AGAGTATATA GGACTTTTTG CTTACTATTT AAGATTCTCC TTCAGATGA
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Protein sequence | MFFIKKLITF FIIPPGLFVL IFLIIAYFSR NNKRVLTISL ASAISIYLIS IEPVKDFLLK PLEAKFQQPK NISGDVIVVL GGGSYNTGIL TEDSLKRVLT GFVLHKRLNV PIILSGGSAI TNLPESEAMK SLLAELGIDK KMIFTDVQSR DTLENAFFTK KICKKYGYKT VILVTSAYHM PRSYMTFKQA GLNVIPYPTD FKMDKKYTVY SYFPKMNVLQ DSTKAIREYI GLFAYYLRFS FR
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