Gene SYO3AOP1_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1020 
Symbol 
ID6332588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1057229 
End bp1057957 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content30% 
IMG OID642657308 
Productprotein of unknown function DUF218 
Protein accessionYP_001931193 
Protein GI188996942 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTA TAAAGAAGCT AATTACTTTT TTTATTATAC CACCCGGATT GTTTGTTCTT 
ATATTTCTAA TCATCGCTTA TTTTTCAAGA AATAATAAAA GAGTTTTGAC CATCTCGTTA
GCTTCAGCTA TTTCAATTTA TTTAATCTCA ATAGAACCTG TTAAAGATTT TCTTCTAAAA
CCTCTTGAGG CAAAATTTCA ACAGCCAAAA AATATAAGTG GAGATGTTAT AGTTGTTTTG
GGTGGTGGTA GTTATAATAC TGGAATTCTA ACAGAAGACT CTTTAAAAAG AGTTCTTACA
GGTTTTGTTC TTCATAAAAG ATTAAACGTT CCAATTATCT TATCCGGTGG GTCTGCCATT
ACAAACTTAC CAGAATCAGA AGCTATGAAA TCTTTATTAG CAGAGCTTGG AATTGATAAA
AAAATGATTT TTACAGATGT TCAAAGCAGA GATACATTAG AAAATGCATT TTTTACAAAG
AAAATCTGTA AAAAGTATGG ATACAAGACT GTTATTTTAG TTACTTCTGC TTATCATATG
CCAAGGTCTT ACATGACTTT TAAGCAGGCA GGATTGAATG TAATTCCATA TCCAACAGAT
TTTAAGATGG ATAAAAAGTA TACAGTTTAT AGCTACTTTC CGAAAATGAA CGTTCTTCAA
GATTCAACAA AAGCAATCAG AGAGTATATA GGACTTTTTG CTTACTATTT AAGATTCTCC
TTCAGATGA
 
Protein sequence
MFFIKKLITF FIIPPGLFVL IFLIIAYFSR NNKRVLTISL ASAISIYLIS IEPVKDFLLK 
PLEAKFQQPK NISGDVIVVL GGGSYNTGIL TEDSLKRVLT GFVLHKRLNV PIILSGGSAI
TNLPESEAMK SLLAELGIDK KMIFTDVQSR DTLENAFFTK KICKKYGYKT VILVTSAYHM
PRSYMTFKQA GLNVIPYPTD FKMDKKYTVY SYFPKMNVLQ DSTKAIREYI GLFAYYLRFS
FR