Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1002 |
Symbol | |
ID | 6332208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1038910 |
End bp | 1040070 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657290 |
Product | aminotransferase class I and II |
Protein accession | YP_001931175 |
Protein GI | 188996924 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03537] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGG CAATAAAAAA TCTTAAAAAT TATCCTATGG AAGAGTTAAA TAAAATTAAA GCATCGCTAA AAGAAAGAGG AATAAAAATT TATGATTTTG GAACAGGTGA CCCAAAAGAA CCAACGCCAG AAATAATAAG AAATGCAATT AAAAATGCAA TTCCGGAAGT TAGCCAGTAT CCATCAGTTG CCGGAAGAAA AGAACTAAGA GATACAATTT CAAAATGGTT TGAAAATAGA TTTTCTGTAA AACTAAATTC AGATACGCAA ATAATACCAT CGGCAGGCTC CAAGGAAGCA ATTTTTCATT TTCCGTTGGT TTTTATAGAC CCGGAGGAAG ATAAAAAAAG AGTCATCTTT GGAACGCCGG CATATCCAGT ATACGAAAGA GGAACGTTGT ATGCAGGAGG GATTCCAACG CCTATAAAAC TAAAAGAAGA AGACGGTTTT TTACTCAGAC TTGATAAAAT TGATAAAGAA ATACTAAAAG AGACAAAGAT TGTATGGATA AACTATCCAC ACAACCCAAC CGGAGCAGTA GCACCTGCAA GCTATTTTGA AGAAACTATA AAAATTTGTC AAGAATATAA TATTATTTTA TGTTCTGATG AATGTTATAC AGAAATATAT TTTGAAGAAA AACCACATTC AGCTTTACAA TTTGGCATGG ATAATGTTGT AGTTTTTCAT TCTTTATCAA AAAGAAGTGG TATGACTGGT TACAGGTCTG GGTTTGTTGC CGGAGATGAA AAGATTATAA GCTTTTATAA AAAAGAAAGG GCAAATTTTG GCGTTGCAAG TCCAGATTTT ATTCAAATGG CAGCTAAGAC AGCATGGGAA GACGAAAGCC ATGTAATTGA AAGAAACAAA ATTTTTAGAG AGAAGAGAGA TTTATTTTTA GAATTCTTAA ATAAAAAAGG TTTTGAATAT CTGTATCCAA AAGCCACTTT TTATATTTGG ATTAAAGCTC CAAACGGAAT CTCTTCAAAA GATTATGCAA AGATTTTGTT AGAAAATGGT ATTATAGTTT CTATCGGAGA AAATTTCTGT AGTAGCACAG AGATAAACGA AGGAACCTGC GAAAGTCAAT ATTTTAGAAT TGCATTAGTT CCAACCATTG AAGAATGTAA AGAAGCGTTA AAAATTTGGG AGAGTATATA A
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Protein sequence | MNKAIKNLKN YPMEELNKIK ASLKERGIKI YDFGTGDPKE PTPEIIRNAI KNAIPEVSQY PSVAGRKELR DTISKWFENR FSVKLNSDTQ IIPSAGSKEA IFHFPLVFID PEEDKKRVIF GTPAYPVYER GTLYAGGIPT PIKLKEEDGF LLRLDKIDKE ILKETKIVWI NYPHNPTGAV APASYFEETI KICQEYNIIL CSDECYTEIY FEEKPHSALQ FGMDNVVVFH SLSKRSGMTG YRSGFVAGDE KIISFYKKER ANFGVASPDF IQMAAKTAWE DESHVIERNK IFREKRDLFL EFLNKKGFEY LYPKATFYIW IKAPNGISSK DYAKILLENG IIVSIGENFC SSTEINEGTC ESQYFRIALV PTIEECKEAL KIWESI
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