| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0988 |
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| Symbol | |
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| ID | 6331423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1021444 |
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| End bp | 1022256 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642657278 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001931163 |
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| Protein GI | 188996912 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAA GATACACAGT AAACTCACCA AAAACATTAA AAGATTTTAT AGCTGAAAGC
TTAAAAATTT CAAAAAATCA AGCAAAAGAT ATTATCGACA GTAGAAATGT TATTGTAAAC
AACAAAAGAG TTTGGATAGC ATCACATAAT CTAAAACCGG GAGATGTAGT TGAGATAGTT
CAAAGTGAGT TAAAAAATGA TTTAAAAATA CTATATGAAG ATGATTATAT CATTGCAATT
GATAAGCCAC CAACAATCGT AAGTGATAAA GAAAGTTCAT CTGCAGAAGA TATACTTAGA
AAGAAATTAA AAAACGATAA AATAAAAGCA ATTCATAGAC TTGATAAGGA AACATCCGGT
GTTTTACTTT TTGCAAAAGA TTATAAAATC TTTGAAAAGT TTAAAGAGAT ATGGGAAGAT
AAAAACGTTT TAAAAATTTA CTTAGCTATA TCTCATAACG AAGCAAACTT TAAAGACTTT
ACAATCAATC AAGATATAGA TGGAAAACAG GCTATTACTC ATTTAAAAGT TTTAAACAAA
GGAAATGGTT TTACATACTT TCAAGTAAGA ATAGAAACTG GAAGAAAACA TCAGATAAGA
AAACATCTTG CAAGTATAAG ACATCCTATC GTTGGAGATA AAATTTACAG TATTAAAAAG
TTTGAGAATA ATTTAGTAAA AAGAGTAACA AGACAGATGC TCCATTCATA CAAATTAGTG
TTGACACACC CTTATTTAAA TAAAAAAATA GAAATAACCG CACCACTTCC ATCAGATTTT
AAGAATGTTT TGAATTATTT GAATGAGAGA TGA
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| Protein sequence | MLKRYTVNSP KTLKDFIAES LKISKNQAKD IIDSRNVIVN NKRVWIASHN LKPGDVVEIV
QSELKNDLKI LYEDDYIIAI DKPPTIVSDK ESSSAEDILR KKLKNDKIKA IHRLDKETSG
VLLFAKDYKI FEKFKEIWED KNVLKIYLAI SHNEANFKDF TINQDIDGKQ AITHLKVLNK
GNGFTYFQVR IETGRKHQIR KHLASIRHPI VGDKIYSIKK FENNLVKRVT RQMLHSYKLV
LTHPYLNKKI EITAPLPSDF KNVLNYLNER
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