| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0978 |
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| Symbol | rho |
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| ID | 6332773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1010977 |
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| End bp | 1012248 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642657267 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001931153 |
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| Protein GI | 188996902 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000458631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGACT TATCAACCAT CACACCTGAA TCATTGAAAG AAAAAACATT GGCAGAATTA
AAAAAATTAG CTGAAGAGAT CGGTGTAGAA AAAATAACAG GACTAAAAAA AGATGAGCTT
ATAGAAAAAA TCATAGAGAA AAAGGAAGAA AAAGAAGGTT TAGTCAAGAT AAATGGTGTT
TTAGAAATCC TTCCTGAAGG TTTTGGATTT ATTAGATTTC TTGAAAACAA TTACGCACCA
AGTCCACAAG ATATATATGT TTCACCTTCT CAGATAAAAA GATTTGGACT TAAAACCGGA
GATACAATTA TCGGAGTAGC AAGGAATCCA AAGGAAGGTG AAAAATACAG AGCATTAGTC
AGAATAGATA GAGTTGGAAG TCTTCCGGTA GAAGAGTTAA AGAAAAGACC ATCTTTTGAT
AAGCTTATCC CATACCATCC AACAGAAAGA TTGAATTTAG AATACGACCC ATCTGATTTA
TCAACTAGGG TTGTTAGCCT TGTAGCACCT ATTGGTAAAG GCCAAAGAGG ATTGATAGTT
GCACCGCCTA AAGCCGGTAA AACAGTTTTA ATCCAAAGAA TAGCAAAAGC TATAATAAAG
AACCATCCAG AAATTCATTT AATAATCCTT CTTATAGATG AAAGGCCTGA AGAAGTTACA
GAAATGAGAA GAATAGTAGG CTCCGGGGCA GAAGTAGTAG CATCTACGTT TGATGAACCA
CCAGAAAGAC ACATACAAAT CTCTGAGCTT GTAATTGAAA AAGCAAAAAG GATAGTAGAG
GAAGGTAGAG ATGTTGTGAT CTTACTTGAC TCAATGACAA GGCTTGCAAG AGCTTCAAAC
GCTGTTACAC CACCATCCGG TAGAGTTTTA TCCGGTGGTA TTGAAGCAAC GGCATTACAA
AGACCTAAAA AATTCTTTGG GGCAGCTCGT AATATAGAAA ACGGCGGAAG TCTTACAATT
CTCTCAACAG CTCTTGTGGA AACTGGTTCA AGAATGGACG ATGTAATATT TGAAGAATTT
AAAGGAACTG GCAATATGGA GCTTTACTTA GACAGAAGAT TAATGGAAAG AAGAATTTTT
CCAGCAATAA ATATAAGTAA GTCTGGAACA AGAAAAGAGG AACTTTTACT GGAAGACTGG
CAACTGCAAA GATTATGGGT ATTGCGTAAA TTCTTATCTA CAATGGATGA AGTTGAAGCA
ATGGAATTTT TGTTAAGCAA ACTTTCCAAA TTTAAGACAA ATGACGAGTT TTTAAGGTCT
ATGAATGCTT GA
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| Protein sequence | MVDLSTITPE SLKEKTLAEL KKLAEEIGVE KITGLKKDEL IEKIIEKKEE KEGLVKINGV
LEILPEGFGF IRFLENNYAP SPQDIYVSPS QIKRFGLKTG DTIIGVARNP KEGEKYRALV
RIDRVGSLPV EELKKRPSFD KLIPYHPTER LNLEYDPSDL STRVVSLVAP IGKGQRGLIV
APPKAGKTVL IQRIAKAIIK NHPEIHLIIL LIDERPEEVT EMRRIVGSGA EVVASTFDEP
PERHIQISEL VIEKAKRIVE EGRDVVILLD SMTRLARASN AVTPPSGRVL SGGIEATALQ
RPKKFFGAAR NIENGGSLTI LSTALVETGS RMDDVIFEEF KGTGNMELYL DRRLMERRIF
PAINISKSGT RKEELLLEDW QLQRLWVLRK FLSTMDEVEA MEFLLSKLSK FKTNDEFLRS
MNA
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