Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0896 |
Symbol | |
ID | 6331075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 930390 |
End bp | 930911 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657187 |
Product | amino acid-binding ACT domain protein |
Protein accession | YP_001931078 |
Protein GI | 188996827 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2716] Glycine cleavage system regulatory protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00320944 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCATT TTATTATTGT AGCAATTGGA GAAGATAGGC CAGGAATAGT TGCAAAAGTT ACTGAAATCC TATTTAAAAA CGGTTTTAAC ATTGAAGATT CATCAATGAC AAGATTAAAC AATGAGTTTA CAATAATGCT GATTGTGAAA GGAGATAAAA GCTTAGAACA TCTTAAACAA GAATTCAGCC AGCTTGAAAA AGAAGGCTTA ACTATCATCA TAAAAGAAGT ATCTGAGGAT GTTATAAACA AACCAAGAAA AAAATTACCA ATTTTCAATA TAGCAGTTTA CGGCTCTGAT AAGCCAGGCA TAGTTTATAA AGTATCAAAA CTACTTGCAG ACAAAGGAAT AAATATCTCA GATTTAAGAA CAGAAAAGGT AAATAGTCTT TATATTATGT TTATAGAATC AGAATTTCCG GAAGAAGTGA ATATTTTAGA GTTTAATAGA GAGATAGAAA AGCTAAAACA AGAGTTAGAT GTTGACATAG AAATAGAAAA CGTAGAAACG GCAGAGTTAT AA
|
Protein sequence | MNHFIIVAIG EDRPGIVAKV TEILFKNGFN IEDSSMTRLN NEFTIMLIVK GDKSLEHLKQ EFSQLEKEGL TIIIKEVSED VINKPRKKLP IFNIAVYGSD KPGIVYKVSK LLADKGINIS DLRTEKVNSL YIMFIESEFP EEVNILEFNR EIEKLKQELD VDIEIENVET AEL
|
| |