Gene SYO3AOP1_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0896 
Symbol 
ID6331075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp930390 
End bp930911 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content30% 
IMG OID642657187 
Productamino acid-binding ACT domain protein 
Protein accessionYP_001931078 
Protein GI188996827 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00320944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATT TTATTATTGT AGCAATTGGA GAAGATAGGC CAGGAATAGT TGCAAAAGTT 
ACTGAAATCC TATTTAAAAA CGGTTTTAAC ATTGAAGATT CATCAATGAC AAGATTAAAC
AATGAGTTTA CAATAATGCT GATTGTGAAA GGAGATAAAA GCTTAGAACA TCTTAAACAA
GAATTCAGCC AGCTTGAAAA AGAAGGCTTA ACTATCATCA TAAAAGAAGT ATCTGAGGAT
GTTATAAACA AACCAAGAAA AAAATTACCA ATTTTCAATA TAGCAGTTTA CGGCTCTGAT
AAGCCAGGCA TAGTTTATAA AGTATCAAAA CTACTTGCAG ACAAAGGAAT AAATATCTCA
GATTTAAGAA CAGAAAAGGT AAATAGTCTT TATATTATGT TTATAGAATC AGAATTTCCG
GAAGAAGTGA ATATTTTAGA GTTTAATAGA GAGATAGAAA AGCTAAAACA AGAGTTAGAT
GTTGACATAG AAATAGAAAA CGTAGAAACG GCAGAGTTAT AA
 
Protein sequence
MNHFIIVAIG EDRPGIVAKV TEILFKNGFN IEDSSMTRLN NEFTIMLIVK GDKSLEHLKQ 
EFSQLEKEGL TIIIKEVSED VINKPRKKLP IFNIAVYGSD KPGIVYKVSK LLADKGINIS
DLRTEKVNSL YIMFIESEFP EEVNILEFNR EIEKLKQELD VDIEIENVET AEL