| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0895 |
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| Symbol | |
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| ID | 6331074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 929879 |
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| End bp | 930388 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657186 |
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| Product | peptide deformylase |
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| Protein accession | YP_001931077 |
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| Protein GI | 188996826 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00298433 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAC TCGAGATTCT TAAATATCCG GATGAAAGAT TAAAAAGAAA ATCTATCGAA
GTCGTAGATT TTGGAAAAGA GTTTAAAGAA TTTATAGAAA AATTAACTTA TACAATGTAT
AATTCACCAG GCGGTGTTGG AATAGCCGCA CCACAGGTGA ACAATCCTAT AAGAACAATA
ATCGTAGACA CATCAAAATC TACACATAAA ACAAATAAAG TTTCCCATGG TTTGATGGTT
TTATCTAATC CAAAGATTGT TCATGCGGAA GGTGAAATAA TTTTCAGAGA AGGTTGTATG
TCAGTTCCGG ACTATACTGG AAATGTAAAA AGATTTTACT ATATTAAAGT AGAAGCTCAG
GATATAAACG GAAATTTAAT AACATTTGAT ACAGAAGGCT TCGAAGCTGT TGTTATTCAG
CATGAAATAG ATCATTTAGA AGGAAAAGTT TTTATAGAAA AAGTAGTTTC TCCAAAAGAT
ATCTTTAGAA GAAAAGTTTA TAAAGAGTGA
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| Protein sequence | MEKLEILKYP DERLKRKSIE VVDFGKEFKE FIEKLTYTMY NSPGGVGIAA PQVNNPIRTI
IVDTSKSTHK TNKVSHGLMV LSNPKIVHAE GEIIFREGCM SVPDYTGNVK RFYYIKVEAQ
DINGNLITFD TEGFEAVVIQ HEIDHLEGKV FIEKVVSPKD IFRRKVYKE
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