| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0882 |
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| Symbol | |
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| ID | 6332758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 915683 |
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| End bp | 917425 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657173 |
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| Product | NADH-ubiquinone oxidoreductase chain 49kDa |
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| Protein accession | YP_001931064 |
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| Protein GI | 188996813 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000293416 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACATGGA TAACTTTAGA TAAAGCTAAA AGGATAAATT CTGTTTTTAA TGTTAAAATT
GAAAGTTATA AAGATATTGT CTGGGTAGAG ATAGAAAAAG ATAATTTAAT CGATCTTTTG
AAATTTCTAA AAGAGGAGCC GGACTTTTCC TTTAAGATGT TTATTGACTT TACAGTCGTA
GATTATCCAT ATCACAACCC AAGATTTCAA GCAGTTTATA TTCTTTACTC TCCAGAATAC
AACGAAAGAA TTATAGTCAA AACTTGGACT GATGATACTC TGCCATCTTT AATTAATCTT
TGGAAAGGTG CCAAATGGGC TGAACGAGAA GCCTATGATA TGTTTGGCAT CAAGTTTGAT
GGCCATGACA ATTTGGTAAG GATGTTTTTA TGGGAGACTT ATCCATACTA TCCACTTAGA
AAAGATTTTC CAAAAGAAGG ATTTAAAGAT ACATATCTAC CATCTTTAAA TGAAGGAAAA
AATATTCCCA GTCATGATTA TGACCCATAC CATACCGCTA TACCAACACT TGAAGACTTA
GAAATAACAG AAAGGAAAAG AATCAGTAAA AAAAATCAAA TAGTTTTAAA CTGGGGACCA
CTTCATCCCG GAACGCACGG AACAATTTGG TTTTTATTTG ATTTAGAAGG TGAGACAATA
AGAGAATGTG ATATCATTCT TGGACAACTT CACAGAGGAA TTGAAAAACT TTCAGAAGAC
CTTACATACA CTCAGATAAT ACCATATACA GACAGAATGG ACTATATCTC GGCTTTATGT
TCAAATATAG CTTATGTTAA TGCAATTGAA AAACTTTTTG GAGTTCAGCC GCCGGAGAAA
GCTAAATGGA TTAGAACTAT GCTGGCTGAA CTTCAAAGAA TCAATAGCCA TCTGCTTTGG
CTTGGCACAA CCGCCCTTGA CCTTGGTGCT TTGACAATGT TTTTATATAC ATTTAGAGAA
AGAGAAAAAT TAATGGATAT TATAGAAGGA ATAGCAGGCA TAAGGTTAAA CTCTTCCTTT
TTAAGGATAG GTGGCATTAG ATATGACCTA CCAGAAGGTG CATTAGATGT AATCAAGCAT
TTTATTAAAG ATTTCCCATC AAGAGTTAAA GATTATGAAG ACCTTCTAAC TAAAAATAGA
ATTTGGATAA GAAGGAATAA AGATGTTGGA ATAGTAAGCA AGGAAGATGT TTACCAGTAT
GGACTTACTG GTGTAATGGC AAGAAGTGCC GGCGTTCCTT ACGATATTAG GTATATTCAA
CCAACAGATG CATACGCTGA TGTCGATTTT GAAATTCCTC TTGGAACAGT TGGTGATGCT
TATGATAGAT ATTTAATCAG AATGGAAGAG ATGAAGCAAA GTTTAAGGAT AGTTCAGCAG
TGTGTAGAGA AATTAGAAAA ACTAAAGAAT GATAAATATG TAGCAACAGA GAATCCTTAT
GTACTTCCAA CGTTGAATGA AGTTTATGGG TCTATAGAGT CTATGGTTAA AGATTTTACA
TTGAGAATTT ATGGAGAAAA AGCACCGGTT GGAGAGGTTT ATGTTTCTGG AGAAAATCCA
AGAGGTGAGC TTGGTTTTTA TATCGTAAGC AAAGGTGAAG GCAAACCTTA CAGATTAAGA
ATAAGGTCGG GCGCATTTTA TAATCTTCAA ATCTTTCCAG AGCTTATAAA AGGAAGGACG
GTAGCTGATG CAGTTGCTCT TCTTGGAAGT ATAGACCCGG TTGTTGGTGA AACAGATAGG
TAA
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| Protein sequence | MTWITLDKAK RINSVFNVKI ESYKDIVWVE IEKDNLIDLL KFLKEEPDFS FKMFIDFTVV
DYPYHNPRFQ AVYILYSPEY NERIIVKTWT DDTLPSLINL WKGAKWAERE AYDMFGIKFD
GHDNLVRMFL WETYPYYPLR KDFPKEGFKD TYLPSLNEGK NIPSHDYDPY HTAIPTLEDL
EITERKRISK KNQIVLNWGP LHPGTHGTIW FLFDLEGETI RECDIILGQL HRGIEKLSED
LTYTQIIPYT DRMDYISALC SNIAYVNAIE KLFGVQPPEK AKWIRTMLAE LQRINSHLLW
LGTTALDLGA LTMFLYTFRE REKLMDIIEG IAGIRLNSSF LRIGGIRYDL PEGALDVIKH
FIKDFPSRVK DYEDLLTKNR IWIRRNKDVG IVSKEDVYQY GLTGVMARSA GVPYDIRYIQ
PTDAYADVDF EIPLGTVGDA YDRYLIRMEE MKQSLRIVQQ CVEKLEKLKN DKYVATENPY
VLPTLNEVYG SIESMVKDFT LRIYGEKAPV GEVYVSGENP RGELGFYIVS KGEGKPYRLR
IRSGAFYNLQ IFPELIKGRT VADAVALLGS IDPVVGETDR
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