Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0851 |
Symbol | |
ID | 6332376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 890586 |
End bp | 891980 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657144 |
Product | beta-lactamase domain protein |
Protein accession | YP_001931035 |
Protein GI | 188996784 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGTAA AATCTTTTGG CGGTGTAGAA GGTGTTACTG GCTCTTGTCA TCTTGTTAAT GTTGGACATC TAAATTTTTT AATAGATTGT GGAATGTTTC AAGGTATAGA TGAGGATAAA AATTATGAAC CATTTGGTTT TAATCCTGCA AAGATTGATT ATCTAATCTT AACCCATGCA CATATTGACC ATATAGGAAG AGTACCCTTA TTAGTAAAAC AAGGATTTAA AGGCAAAATT ATCTCAACCC GGGCAACTTA TGCTTTAGCA AGAATTATGC TTCTTGATGC TGTTAAAGTA ATGTCTGAAG AGTATAAAGT TAACTATAAA AAAGCTTTAA GAAGAGGAAA GCCTGAAGAA GTAAAGCCGG TTTTATATGA TGAAGACGAT GTATTCCAAG CAATGGAACA TTTCAAAATA TTCTTAGAAT ATGATGAGTC ATACAAACTG TCTAAGGATG TAACTATCAC ATTTAGAAAT GCTGGACATA TTCTTGGCTC TGCTTACGTT GAACTTTTGG TTAACGATGA AGGAAGAAGT AAAAAAGTAA TCTTTTCTGG AGACTTAGGA ACAAATAATA AATTGGTTAT AAGAGAGATA AATTATCCCC AAGATGCAGA CTTTATCTTT ATTGAATCAA CTTATGGAGA TAGAAAACAT AGACCACTTC CCGAAACTAT AAACGAGTTT AAAACAGCTA TTATAGAAAG TTTCAAAGAT GGTGGGAATG TAGTAATTCC AACATTTGCA CTAGAAAGAG CCCAAGAGAT TTTATTTATC TTACGAACGA TGTATGATAA TGGTGAACTT CCGCCTTGTA AAATCTTTTT AGATAGCCCA CTTACAATAG CTGCAACAAA GCTATTTTTA CAATTTCCAA ACCAGTTAAA TGGTGAAGTC TTAAAACTTT TAAAACAAAA TAAAAATCCT TTTGTTTTTC CATGGGTTTA TTTTACAGAA TCTGTTGAGG AATCAAGAAA GATAAATGAG ATAGAATCTG GTGCAATCAT ATTGGCTGGA AGTGGAATGT GTACCGGCGG AAGAATTAAA CATCATTTAA AACACAATCT TTGGAGAGAA AACTCTTCAG TGATTTTTGT TGGCTACCAA GCAGAAGGAA CTCTTGGAAG ACAGATAATA GATGGAGCTA AATATGTTAA GATTTATGGT GAAGAAATAG CAGTTAAAGC TAAAATTTAT ACTATAAATG GATTTTCTGC CCATGCTGAC CAAGAAAATT TATTAGATTT TATCAAGCAA ACAAAAGGTG TTGAGACTGT CTTTCTTATT CACGGTGAAC CAAAAATTCA AGAAATTTTC AAAGAAAAGA TAAAAGAAAC ATTAAACCTG CCAACTCATA TTGTAAAAAG ACATGAAAAT GTTTATATTG TTTAA
|
Protein sequence | MIVKSFGGVE GVTGSCHLVN VGHLNFLIDC GMFQGIDEDK NYEPFGFNPA KIDYLILTHA HIDHIGRVPL LVKQGFKGKI ISTRATYALA RIMLLDAVKV MSEEYKVNYK KALRRGKPEE VKPVLYDEDD VFQAMEHFKI FLEYDESYKL SKDVTITFRN AGHILGSAYV ELLVNDEGRS KKVIFSGDLG TNNKLVIREI NYPQDADFIF IESTYGDRKH RPLPETINEF KTAIIESFKD GGNVVIPTFA LERAQEILFI LRTMYDNGEL PPCKIFLDSP LTIAATKLFL QFPNQLNGEV LKLLKQNKNP FVFPWVYFTE SVEESRKINE IESGAIILAG SGMCTGGRIK HHLKHNLWRE NSSVIFVGYQ AEGTLGRQII DGAKYVKIYG EEIAVKAKIY TINGFSAHAD QENLLDFIKQ TKGVETVFLI HGEPKIQEIF KEKIKETLNL PTHIVKRHEN VYIV
|
| |