Gene SYO3AOP1_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0833 
Symbol 
ID6332353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp872976 
End bp873650 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content30% 
IMG OID642657129 
ProductABC transporter related 
Protein accessionYP_001931020 
Protein GI188996769 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAA TTATAAAAGT AGAAAATATA AACAAGTTTA TTGCTAATGA GCATATTTTA 
AAAAATATTA ATCTTTCAGT AAAACAAGGA GAGTTTGTAA GTATTATAGG TCCATCCGGT 
TCAGGAAAAA GTACATTACT ATACATACTT GGACTTTTAG ACCAGCCAAC AGATGGAAAA 
GTTTTTGTTG AAAATCAAGA AATAAATTTT AAGGATAAAA AAAGAATTTC AGAAATAAGA 
AACAAGAAAT TTGGATTCGT GTTTCAGTTT CATTATCTGA TAAATGAACT TACAGCTTTA 
GAAAATGTTA TGGTTCCAAT GTTAAAAAGT GGAGTAGAAA AATCTGCGGC AGCGGATAAG 
GCAATAAAAA ATCTCGAAAA GCTTGAACTT GAAAAAAAGC AAGACAGAAG ACCTTACGAG 
TTATCAGGTG GCGAACAGCA GAGAGTATCT ATTGCAAGAG CTTTATCAAA CAATCCATTG 
GTAATTATTG CAGACGAACC AACGGGGAAT CTTGACTCAA AAAATACCGA AATAGTCATG 
GAAATATTTG AAAATCTAAA CAAAGAAGGA AGAACTATAA TCATGGTAAC TCACGAAATT 
GATTTAGCAG AAAGAACTCA AAGAATCATA AAATTAAAAG ATGGTGAAAT TATAGAAGAT 
TTAAAGAAAA TTTGA
 
Protein sequence
MMEIIKVENI NKFIANEHIL KNINLSVKQG EFVSIIGPSG SGKSTLLYIL GLLDQPTDGK 
VFVENQEINF KDKKRISEIR NKKFGFVFQF HYLINELTAL ENVMVPMLKS GVEKSAAADK 
AIKNLEKLEL EKKQDRRPYE LSGGEQQRVS IARALSNNPL VIIADEPTGN LDSKNTEIVM 
EIFENLNKEG RTIIMVTHEI DLAERTQRII KLKDGEIIED LKKI