| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0771 |
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| Symbol | |
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| ID | 6331451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 803246 |
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| End bp | 806308 |
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| Gene Length | 3063 bp |
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| Protein Length | 1020 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657061 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001930958 |
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| Protein GI | 188996707 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.166724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACT TTATCTTAAG ATATAAATTT ATAGTTATTT TCATTCTGTT CTTGATTGTT
GGTATTGGTA TTTACTCATT TAAAAGCTTA CCAATAGATA CTTTTCCAGA CCCAACACCA
GTTCAAGTAA ACATTTACAC AGAAGCTCCC GGCTTGTCGG CTGAGGAGGT AGAAAGTCTT
ATTACAAAAA AAGTAGAAAC ATCCATGTCT GGAATTAAAG ATGTTACAAC CGTTAGAAGC
GTATCTTTAC CCGGTTTATC TTATGTATCG ATATTTTTTA AAGACGGAAC GGATATATAC
TTTGCAAGAA GGCTTGTAAT GGAGAAATTA ACAGCAGTAA AAGGAATGCT GCCATCCCAG
TATAATCCGG TGATGGGACC AAACAGCTCA GGGCTTGGAA ATGTTCTTTT TTATGTTTTA
ACATCTAAAA CAACTCTTTT AACAGATTTA AGAACTATCC AAGAATGGAA GATTAGACCT
TTGATAATGT CGGTTGATGG AGTAGAAGAG ATAAGCCAGT GGGGACCAGA AAAAGCTTTT
TTAGTAAAGC CAGACCCGGA GAAATTACTT GCCCTTGGAT TATCTCTTGA TGACATAGCT
AATGCAGTAG AAAAAGGCGC TGGAATTGCA GGCGGTGGAT TTTCTAAAAC TCCGGAAGGA
GATTTAATCG TTAGGTCAGT TGGATACTAC ACAAGCATTG AAGATATCGG AAATATATCG
ATCCAATCCT TAAATGGAAC TATCATAAAA CTAAAAGACA TAGCCAAGAT AGAAGAAGGG
GAAGTACCAA ACAGAAGAGG AGCTTTTACA TTAAACGGTG AAGAAGTGCA AGGAAACATC
ATCTTAAAAA GAGTAAATAC AAGCACCCAA GAATTGGTAG CTAAATTAAA AGAAAGAATT
GAAGAAGTTA AAAAAATACT GCCTAAGGAT GTGGATTTAA AAGTAATCTA TGACCAGTCT
TATCTCACCC AAAAGGCGAT CTTTACAATA GAAAAAGCTT TATTGGAAGG AATAATTTTA
ATCTCTATTG CTATGCTTTT CTATCTTGGC AATATCAGAG CTGCTTTTTT AGTTGTTCTA
TCTATTCCGC TTACTCTTTT AATGGCTTTC ATATTCATGA AAAACTTTGA TATAAGCGGT
AATTTAATGT CTTTAGCAGG TCTTGCTATT GGAATAGGGC TTTTTGCAGA TGCGACGGTT
GTGGTTGTAG AAAATATTTA CAGACATTTA CATGAAACCG GTCTATCTCA AATAGGAGAA
TCTAAAAACA GCATAGTTTC AAAGTCAGTA AAAGAAGTTT TTAAACCGGT TTTATTTGCA
ATTTTAATAA TAACCATCGT CTTTTTGCCT ATCTTTAGTT TTGAATCTGT TGAAGGTAAG
TATTATAAGC CGTTAGCTTT GACAATAATT TTTGCTTTAA TCTCATCTCT TTTAGTTGCA
TTTGTGTTTA TGCCTGTAAT GTCTTATTTC ATTTTAAAGC CATCTAAAGA AGAAGAGACA
AAAATCATGA GATATATAAA CGATGTATAT CACAAGATTT TATACAAACT ATTAAGATAT
CCAAAGGCGG TTATTTCTAT CGTTTTAACG GCATTTATTT TTTCCTTGTT TTTACTTTCA
AGAATAGGAA CAGAGTTTGC ACCTACTCTT GATGAAGGAG CTGTTTTAGT AAAAAGCTTT
TTAAATCCAA ACGTCTCTTT ACAAGAATCA AAAATGGTTG CAAGCTTTGT GGAAGAAATG
GCAAAATCCT TTCCAGAAGT TGAAAATGCT TTTTCGAACA TAGGAAGAGC AGAAAGAGGT
GAGCCAGAAG ATGTTAGCTA CATAGAGACG TTCATCACTT TAAAGCCATA CGACCAATGG
AAAAATTTTA AAACTAGACA AGAGTTTGAA AATGCACTTC GGGAAAAACT TAAAGATTTC
CCCGGGGTAT CATTTAGCTT TACACAACCT ATCCAAATGA GAATCGATGA ACTTTTATCC
GGCGTAAAAT CTACCGTGGC TATAAAAGTG TTTGGAGACG ATTTAAACAA AGTAAATGAA
ATAGCTTTCA AAATTAAAGA GATAGTCGAA AATACAAAAG GTGCTGTCGA TGTAGAAACA
GAAAGCCAAT CAGGAAAACT TCAACTTAAG ATAACTCCAA AGATAGACCA GCTAAATAGA
TACAATCTAA AAACAGAAGA TATTTTAGCT CTTGTTGGAA AATACTTTGC AGGATACGAA
GCAAATCAAG TAAAAGAAGG GCTGATAACA TTCCCTGTAA TCGTCAGACT TCCGGAGGAT
TATATAAACG ATATAGAAAA GATAAAAAAC ATTCCTATCC AAACGAAAGA TGGCTACTTG
CTTACATTGT CACAGGTTGC AGATTTAGAG ATAACGCCCG GATTTTTCAA GATAAGACAT
GAAAATGGAA TTAGGTATGC CTTGGTTCTA TCTAATCTTG AAGGAAGAGA TTTAGGTGGA
TTTGTCCAAG AGCTAAAAAA TAAGATAAGC ACACAGATAA AACTTCCGGA AGGTTATTTT
ATACAATTCT CAGGACAGTT TGAAAACCAA GAAAGAGCAA TGAAAAGACT GTCTATCATT
GTTCCAATAG CAATTTTCTT AATCTTTGTC TTGCTGTATA TAAATTACAA CTCAGTAAAA
GATGCTTTGA TAGTTATGTT AAACGTTCCT TTTGCTACCA TTGGCGGAAT AGTATCGCTC
TACATATCAG GCTATAACCT ATCAGTTCCG GCTGCAATTG GATTTATTGC TGTATTTGGC
ATTGCTACAT TAAACGGAGT TGTGCTAATA TCTTATATAA GACAGCTTTT ACAGGAAGGA
TTAGATATAG ATAAAGCTAT AGAAAAAGCA ACCCGCTTAA GACTAAGACC AATATTAATT
ACAGCTACCG CAGCATCCTT AGGACTTATA CCAATATTAC TAACCTCAGA TATTGGTTCA
GAAACTCAAA AACCTATTGC TACTGTCGTC ATAGGTGGAA TATTCACATC TACCATGCTA
ACACTGTTAA TTTTACCTAT AGTTTATAAG ACGTTTTACA GAGTCGGACT GAAAAATGCT
TGA
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| Protein sequence | MIDFILRYKF IVIFILFLIV GIGIYSFKSL PIDTFPDPTP VQVNIYTEAP GLSAEEVESL
ITKKVETSMS GIKDVTTVRS VSLPGLSYVS IFFKDGTDIY FARRLVMEKL TAVKGMLPSQ
YNPVMGPNSS GLGNVLFYVL TSKTTLLTDL RTIQEWKIRP LIMSVDGVEE ISQWGPEKAF
LVKPDPEKLL ALGLSLDDIA NAVEKGAGIA GGGFSKTPEG DLIVRSVGYY TSIEDIGNIS
IQSLNGTIIK LKDIAKIEEG EVPNRRGAFT LNGEEVQGNI ILKRVNTSTQ ELVAKLKERI
EEVKKILPKD VDLKVIYDQS YLTQKAIFTI EKALLEGIIL ISIAMLFYLG NIRAAFLVVL
SIPLTLLMAF IFMKNFDISG NLMSLAGLAI GIGLFADATV VVVENIYRHL HETGLSQIGE
SKNSIVSKSV KEVFKPVLFA ILIITIVFLP IFSFESVEGK YYKPLALTII FALISSLLVA
FVFMPVMSYF ILKPSKEEET KIMRYINDVY HKILYKLLRY PKAVISIVLT AFIFSLFLLS
RIGTEFAPTL DEGAVLVKSF LNPNVSLQES KMVASFVEEM AKSFPEVENA FSNIGRAERG
EPEDVSYIET FITLKPYDQW KNFKTRQEFE NALREKLKDF PGVSFSFTQP IQMRIDELLS
GVKSTVAIKV FGDDLNKVNE IAFKIKEIVE NTKGAVDVET ESQSGKLQLK ITPKIDQLNR
YNLKTEDILA LVGKYFAGYE ANQVKEGLIT FPVIVRLPED YINDIEKIKN IPIQTKDGYL
LTLSQVADLE ITPGFFKIRH ENGIRYALVL SNLEGRDLGG FVQELKNKIS TQIKLPEGYF
IQFSGQFENQ ERAMKRLSII VPIAIFLIFV LLYINYNSVK DALIVMLNVP FATIGGIVSL
YISGYNLSVP AAIGFIAVFG IATLNGVVLI SYIRQLLQEG LDIDKAIEKA TRLRLRPILI
TATAASLGLI PILLTSDIGS ETQKPIATVV IGGIFTSTML TLLILPIVYK TFYRVGLKNA
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