| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0768 |
|---|
| Symbol | |
|---|
| ID | 6331448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 800950 |
|---|
| End bp | 801420 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657058 |
|---|
| Product | putative signal-transduction protein with CBS domains |
|---|
| Protein accession | YP_001930955 |
|---|
| Protein GI | 188996704 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000458984 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATAT CATTAGGAGA TTGTTTGCCT GAGATTGACC CGGTTGTTTC GTTTGACTTA
ACATTGAAAG ATGTTATCTC TAAGATGGCA GAGTATAACA GAGGTTTTGT TATATTGGTT
AACAATGGCT CTCCAAAAGG TATTTTAACA GAAAGAGATG TAAATAAATT ATTTTCTTTG
AACGTTTCAT TAAATGAACC TGCTATAAAT TTTGCGAATA AGAATATTGT AACAGCAAAA
CCTAATATAT CAATTTACTA TGGCATTGAT TTAATGCTTG AAAATAATAT AAGAAGATTG
GTATTGGTTT CTGACGACGG AAAATATGTG GGCACTGTAA CGGTTGACGA TATACTCAGA
CATCTTGATG ATGAGGCTTT AACCAGAAAG ATAAAAGTAA GAGATCTAAA ATTCAAAAAT
GTAATAACCA TAAATAGCGA TGCAACATTA TACGAAGCAA GTAGATGCTG A
|
|---|
| Protein sequence | MLISLGDCLP EIDPVVSFDL TLKDVISKMA EYNRGFVILV NNGSPKGILT ERDVNKLFSL
NVSLNEPAIN FANKNIVTAK PNISIYYGID LMLENNIRRL VLVSDDGKYV GTVTVDDILR
HLDDEALTRK IKVRDLKFKN VITINSDATL YEASRC
|
|---|
| |