Gene SYO3AOP1_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0707 
Symbol 
ID6332296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand- 
Start bp728604 
End bp729224 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content30% 
IMG OID642656995 
Productpentapeptide repeat protein 
Protein accessionYP_001930897 
Protein GI188996646 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTA CAAGAGAAGA AATAGAAAAA TTAATAAAAG AAGGGAAAGA TTTAGACTTT 
TCTTTTATGG ACTTAGAAGG TATTAATCTA TCTGGTTTAG ACTTATCAAA CGCAACTTTT 
ACTGGTACAA ATTTGAAAAA TGCAAATTTA GAGGGTGCAA ATTTAGAAGG TGCTTTTATT 
GCTGATGCTA ATTTTGAAAA TGCAAACTTG AAAGATGCAA ATTTACACAA AGCAGTTTTG 
CAAAGAGTAA ATCTAAGAAA TGCAAATTTT GAAAATGCTA ACTTATTTAG AACGGCTATT 
TTAGTAAGCG ATGCATCAAA AAGTAATTTT AAAAATGCCA ATATGTTAAA CGTTAGACTT 
GAAGATTGCA AATTTACAGA AGCTGTGTTT GATTATGTAG ATATGAGACA CTCTAATGTA 
AGAGGTTCAG ATTTTCAAAA AGCTTCTTTT GTAATGACAA AATTTAGCTT TAGTGATTTT 
AGAAAAACTA AATTAGCTGG TACTTGGTTT GAAAATGTTG AAGCGGAAGA GGTTTTAGTT 
TATGGTAGAA AGCCATGGCT TGAAGGTTCA AAAGCAGAAG TCAATTATTC AAAAATACTT 
CCAAGCAACT TTGATGATTA A
 
Protein sequence
MELTREEIEK LIKEGKDLDF SFMDLEGINL SGLDLSNATF TGTNLKNANL EGANLEGAFI 
ADANFENANL KDANLHKAVL QRVNLRNANF ENANLFRTAI LVSDASKSNF KNANMLNVRL 
EDCKFTEAVF DYVDMRHSNV RGSDFQKASF VMTKFSFSDF RKTKLAGTWF ENVEAEEVLV 
YGRKPWLEGS KAEVNYSKIL PSNFDD