| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0601 |
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| Symbol | |
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| ID | 6331659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 617104 |
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| End bp | 618867 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656888 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001930793 |
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| Protein GI | 188996542 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATA TAAACTACAT CACACAAGAA AATCAGCTTG AAAGTCTAAA AGTATTACAA
GATACGCCTT ATCTGTATTT AGATACAGAA GTAATGATAA AAGATTTTGA AAACATAGAT
TTTTTCAATG ATAAAATCAG GCTTATTCAA ATTGGTGATG AAGAGAATAC TTTTGTCATT
GACTTACTAA AGATAAATCC TGAAGTGGTT AAAAATCATA TTCAAAACCT GATAGAAAAT
AAAGGAATTA TCGGACATAA CTTAAAGTTT GACTTAAAAT TTTTAAAAAC AAATTTGAAC
ATACTCCCAA AAATCGTTTT TGATACTATG ATAGCATCTC AGATATTGGC AAAAGGAGAC
AGCAATCAAA GGCATTCTCT ATCAGCATCT GCAAAAAGAT TTGTCAGCTT AGATGTAGAT
AAAACATATC AAAAATCACC TTGGTGGGCA AAAGACCTTT CATCTGAACA GATAGAATAC
GCAGCAAAAG ATATAGATAC ATTAAGACAT CTTTTTAAAG AAGAGAAAAA TCAATTAAAT
CAAGATAATT TGCATAAAAA GGCATCAGGA GAAACTTTTA AAGTTTTTGG TGTGATTAAT
CCGGTAGCAG CACTTGAAAT GGCTTTTCTT CCGGCACTCG TAGAGATTGA ACTCTCAGGC
ATTCCAATAG ATGAAGAAGA GGCAAAAAAA CTTCTAAAAC AAAAAGAATC TGAATTTCAA
TCTGACTATA TGAAATTTAA AATAAAAACA GGAGCAGACC CATTTTCTCC ACAGCAGGTG
GTAAACTATC TAACAAACAA ACTTAAAATC AAATTACCAA AAACAGAAAA AGGTTCGTTT
TCATCTCAAG ATGTATTCTT AAAAGACTAT GAAGATATAG AAGAAGTCAG ACTGCTTTTA
AAACTAAGAG CAGACAAAAA AATAATCGAT AAAATCAAAG AGATATTACA ATTTACAAGA
AACGAAAGGG TTTACGGAGA GTTTAAGCAG ATTGGAGCAG CAACAGGAAG AATGTCATCA
CTTCGTCCAA ACCTTCAAAA CATACCAAAA AATCTTAAAT ATCTGTTTAA ACCTAAGGAA
GGATATAAGT TTATAGTGGC TGACTACTCT CAGATTGAGC TAAGAATTGC TGCCCAGTAT
ACAAAAGATG AAAACATGAT TACCGCCTTT AATGAAGGTA AAGACCTACA CAAGCTTACA
GCTTCAATCA TTACAGGAAA AAGTTATGAT GAAATCACAA AGGAAGAAAG ACAACTTGCA
AAGGCTATAA ACTTTGGTTT AATCTATGGA ATGTCTCCAA AGTCGCTAGT AGAGTATGCA
AAGGCTAATT ATGGCGTCAG TATATCTCTT CAGGAAGCTA AAAAATTTCA TGAAAATTAT
TTTAAATTTT ACAAATCTTT TAAAGATTGG CATGACAAAG TTAAAGAACA TCTTGATAAA
CACAGGTCTA TTGAGCTTGA AACGTTGCTT GGTAGAAAGC TAATAGCATA CAAATTTACA
GACGCAGTTA ACTATCCAAT TCAAGGCTCA GGCAGTGATT TATTAAAAAT GGCTGTTGTG
TTTTTCTTTA AAGAAAGAAA CGATTTAGAT GCGAAGGTTG TTAACCTTGT TCATGATGAA
ATCCTGGTAG AAGTTGCTGC AAAAGATATA GAAAAGGCAA AAGAGGTTTT ATCTTCATCT
ATGGAAAAAG CAGGAAAATT AATTTTAAAA GATGTTCCAG TTGCTTTTGA AATGGTTGTT
TCTGATAGTT GGAATAAGGG GTAA
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| Protein sequence | MMDINYITQE NQLESLKVLQ DTPYLYLDTE VMIKDFENID FFNDKIRLIQ IGDEENTFVI
DLLKINPEVV KNHIQNLIEN KGIIGHNLKF DLKFLKTNLN ILPKIVFDTM IASQILAKGD
SNQRHSLSAS AKRFVSLDVD KTYQKSPWWA KDLSSEQIEY AAKDIDTLRH LFKEEKNQLN
QDNLHKKASG ETFKVFGVIN PVAALEMAFL PALVEIELSG IPIDEEEAKK LLKQKESEFQ
SDYMKFKIKT GADPFSPQQV VNYLTNKLKI KLPKTEKGSF SSQDVFLKDY EDIEEVRLLL
KLRADKKIID KIKEILQFTR NERVYGEFKQ IGAATGRMSS LRPNLQNIPK NLKYLFKPKE
GYKFIVADYS QIELRIAAQY TKDENMITAF NEGKDLHKLT ASIITGKSYD EITKEERQLA
KAINFGLIYG MSPKSLVEYA KANYGVSISL QEAKKFHENY FKFYKSFKDW HDKVKEHLDK
HRSIELETLL GRKLIAYKFT DAVNYPIQGS GSDLLKMAVV FFFKERNDLD AKVVNLVHDE
ILVEVAAKDI EKAKEVLSSS MEKAGKLILK DVPVAFEMVV SDSWNKG
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