| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0411 |
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| Symbol | |
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| ID | 6332218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 427171 |
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| End bp | 428514 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656702 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001930608 |
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| Protein GI | 188996357 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000674118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATATA AATTCATAAT ACTATTGGTT TTGATAGGGT TTTTAATACA ATCTTGCTCC
GTTCAAGTTA AAGAGAAGAA AAGCTCTACT TTCAAAGATA CATATAAACT AAAGACTGTC
GTAAAAAACG AAAATAAAGA AAAAATTGAG TCAAAAACAT CAGAGAGTAA TAACACAAAA
AATGAAGTCT TAATAGCCAT TACAGAAGAA GATGAAAATT TTATCAAAAA AGAAGCATCT
GCATTAAACA TGCAAATTCC GGATGATAAA GATATAGATT ATTTTATAGA TTACTTTACA
ACGACAAAAA AATACTTTAC AGAAAATGCT CTCAAAAGAG CAAACTACTT TATGCCAATG
GTAAGAAAAA TTTTTAGACA GGAAGGACTA CCGGAAGAAT TGGCATATCT TGCGGTTGTT
GAAAGCGGCT TTAATCCTTT TGCTACATCT TCTGCAAATG CAGCCGGAAT TTGGCAGTTT
ATTCCATCTA CCGGTAGAAG GTTTGGATTA AGAATAGATG ATTACATCGA TGAAAGAAGA
GATCCATACA AATCTACAAT AGCAGCTGCA AAATATTTAA AGACTTTATA CAACATGTTT
GGTAGTTGGG AGCTTGCAAT TGCAGCATAC AACTGCGGAG AAAAATGTGT TGCAAAAAGA
TTAGAATCCT CGTCAGCCAC ATCTTTTTCT GAGATAAAAA ATATCCTTCC ATCACAAACA
AAAGAGTATG TTCCAAGATT TTTTGCCATT CTTTTGATTG CTAACAATCC TGAAAAATAT
GGATTAGATG TTAAAACAAA TATTTATGAT GTTATTAATT TTACTGCCGA CAGAGAGATA
AACTTAAATG ACTTGGCGCA AGAGAAAAAA GTTGAATTTG ATATTTTAAA ATTCTACAAT
GCCCATTTAA AGAAAGATAT AGCATTTGAA GGAATAAACA TAAACCTTCC AAAGCTTGAT
TACGCTGCAA CCTTTGACAG AAGATTCATA ACAACACAGC CAATTGCTAA AAATAAAACC
AGTGAAAATA GATATGTAGC AAAAACATCA AACCCTAAGC CTTCAACTGA ACCTGCTCAA
ACAATTGTCT CCCAAACTCA GCCTCCTAAG AGTGAAAATA GTAGCGAATC TTTAATATCA
CTAATCAAAA CATCTGAAAA ACCGGAGATT GTTAAAACAT CCTATAAGCC ATCTTCAAAT
AAAGAAAATG TTTATATCGT TCAAAAAGGA GATACATTAT TTAGCATTGC AAGAAAGTTT
GGTGTATCTG TTGACGTTTT GAGAAATTTA AATAACTTAG AAGATAACAA TATTAAAGTT
GGACAGGAGC TATTGATTCC TTGA
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| Protein sequence | MRYKFIILLV LIGFLIQSCS VQVKEKKSST FKDTYKLKTV VKNENKEKIE SKTSESNNTK
NEVLIAITEE DENFIKKEAS ALNMQIPDDK DIDYFIDYFT TTKKYFTENA LKRANYFMPM
VRKIFRQEGL PEELAYLAVV ESGFNPFATS SANAAGIWQF IPSTGRRFGL RIDDYIDERR
DPYKSTIAAA KYLKTLYNMF GSWELAIAAY NCGEKCVAKR LESSSATSFS EIKNILPSQT
KEYVPRFFAI LLIANNPEKY GLDVKTNIYD VINFTADREI NLNDLAQEKK VEFDILKFYN
AHLKKDIAFE GININLPKLD YAATFDRRFI TTQPIAKNKT SENRYVAKTS NPKPSTEPAQ
TIVSQTQPPK SENSSESLIS LIKTSEKPEI VKTSYKPSSN KENVYIVQKG DTLFSIARKF
GVSVDVLRNL NNLEDNNIKV GQELLIP
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