Gene SYO3AOP1_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0400 
Symbol 
ID6331976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp416933 
End bp417547 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content30% 
IMG OID642656691 
ProductdTMP kinase 
Protein accessionYP_001930597 
Protein GI188996346 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones112 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTTT TTATTACGTT TGAAGGAATA GAAGCATCAG GTAAAACTAC ACAGATAAAT 
CTTCTTTATG ATTACTTAAA AAGTATAGGT AAGAATGTTA TAAAGACAAG AGAACCCGGC 
GGGACTAAAA TAGGTCAAAA AATTAGAGAA ATATTACTTT CAAAATGGGA TGAAAAATTT 
CCATACATAG CTGAACTTTT ACTTTACGAA TCAGACAGAA ATATACATAT TCAAAGCATA 
GTCAAACCAA GCTTAGATGC CGGTTATATA GTTTTATCAG ATAGATACAT TGACTCTACA 
ACTGCATATC AGCACTATGC AAGAGGGATT GATTATGAGA TTGTTAGCTA TCTAAATACT 
CTTGCAACAG ATGGATTAAA GCCTAATTTA ACATTTTTGA TAGATATTCC TGTTGAAATT 
AGTCTTAAAA GATTAAGCGA AAGTAAAGAC AGGATAGAGA GCGAAGATAT AGAATTTCAT 
AAAAAGTTAA GAGAAGGATT TTTAAAGATT GCTGAAAATG AAAAAGGTAG ATTTGTTGTC 
ATTGATGGAA CGATGGATAT TATGGAAATA CACAAAATTA TTGTTGATTC GTTAAAACAG 
AGAAGCATAA TATGA
 
Protein sequence
MGFFITFEGI EASGKTTQIN LLYDYLKSIG KNVIKTREPG GTKIGQKIRE ILLSKWDEKF 
PYIAELLLYE SDRNIHIQSI VKPSLDAGYI VLSDRYIDST TAYQHYARGI DYEIVSYLNT 
LATDGLKPNL TFLIDIPVEI SLKRLSESKD RIESEDIEFH KKLREGFLKI AENEKGRFVV 
IDGTMDIMEI HKIIVDSLKQ RSII