| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0365 |
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| Symbol | |
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| ID | 6332348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 382509 |
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| End bp | 383009 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642656655 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001930563 |
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| Protein GI | 188996312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000438185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG ACCTTATAGC CATTGGAAAG ATTCACGGAA CCCATGGCGT AAAAGGCAAT
TTAAAATTTG AGATATTTGT TAAAAATTTT TATCTACCGG AAGAGATATA CATAAAAGAT
GAAGAAAATG AGCTGCAACC TTTGAACATA GAAACCGTAG ACAGAAAAAA AGGATTGATA
AAGTTCAAAA ACTATGACAC ACCAGAAAAA GCAAAAGAAA TTAGCCATAG GCTAATTTAT
GTACCAGAAG ATTTGCTGCC AAAACTTGGA GAAGATGAGT TTTACGAATT TCAATTAATT
GGAATGGATG TTTATTATAA TGACAAGCTA ATTGGAAAGG TTGAAAAAAT AGATGATAGA
TTATCTCAAG CGTATTTGAT AATAAAATGC ACAGATGAAA AAACAAGACA CTTACCATTT
ATTAATGAAT TTGTGAAAGA TGTAAATGTA AAAGAAAACA AAATGCAAAT AACACCGCCG
GAAGGATGGT TTAGCTTATA G
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| Protein sequence | MKKDLIAIGK IHGTHGVKGN LKFEIFVKNF YLPEEIYIKD EENELQPLNI ETVDRKKGLI
KFKNYDTPEK AKEISHRLIY VPEDLLPKLG EDEFYEFQLI GMDVYYNDKL IGKVEKIDDR
LSQAYLIIKC TDEKTRHLPF INEFVKDVNV KENKMQITPP EGWFSL
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