| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0364 |
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| Symbol | |
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| ID | 6332347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 379688 |
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| End bp | 382504 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642656654 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001930562 |
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| Protein GI | 188996311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000435275 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TAAACAGTAG ATCCTTAGAG CTTTTTTCTC AGAATGAAAA AGAAAGCTTG
ATAAAACTAA ATATTATTTT GGCATTAGTC TTAACTCTAT TTTTTTGTTC TTATGCAGAA
GTAAAAGTCC CGGAGGTAGT TTTTCCGTTA GAAATAACGA CAAAAATCAC TGAAGAAAAA
CCCTATTTAG AACCACCTAA TACTCTTGAG CTGAAAACTT TAAACGAAGA ATTAAATATT
ACACAATACA TAAAACCAAA AAAACCGACA GATGTAAAAC TTCCAGTCCT TACCATAGAA
AAACCTACAG CTTACTTAGG AATCCCTCCA TCAAATGCAC TATTATCCGA TGCAATAGAT
TACTACAACA AAGGAGATTT ATTGTTTGCT GAAAGCAGTC TTGAAAAATT TATAGAAAAA
TATAAAGACC ATAAAAACCT GTTTTATGCT TATTATCTAC TTGGGGTAGT TAAATACAAT
CTTGGAAAAT ACCTGGAGGC AGAAAGTAAT CTATCAAAAA GCTGTGAAAT ATTAAAAACA
AAAGAGGCAT GCCTATCTTC AGCTATTGTT AATATAATGC TTGGCAATCA AGAAAAAGCC
AAATTCTTAT TATCACAATT TGACAAAGAT ATAGATGTTA GTTTTTATAA TCAAGTGATA
AATCTACTAT CAGGCGGTAA AGCTGATTTT AACAATATAA ATTGCGATAA TTTAGACATT
GGAAGCATAG AGTACTGTCA ATACATTCAA AAGTATTATA ATTTTTCAGT AGGAAACTTT
TTAAAGGCTT TAAAGATAAA ATACACAGGC AAGAACAAAC AGTTAATATA TGACTCTATC
TTAATAGATG GATTTTCTTA TTATTATACA GGTGATTATC AAAATGCTTT GGAAAAATTC
AACCTTATTC TCAAAGAAAA CACAAATGGG TATGTTTATA ATCTTGCTTT ATACGGTAAA
GCTTTAATAG ATTCAAATAA CATTGATGAC TACGCAGGCG TTTTACAATC AAGAGATGAG
CTTTTAGCAC ATTATCTTTA CATAAAACTT GCAAATGAAA GGTTTAAAAA AGGAGATTAT
TTAGATGCTT TTATATACTT CCAAAATGCT ATAAAGCTAA CAGACAAAAA TAAAACATAC
TTAAAGCTTG CCATTGCAAC ATCTTTATAC AATCTTAAGA ACTACGACTA CGCATTAAAA
TTATTTTCTG ATTTAACGAC AGAAACAAAA GACCCGGAAG TATTTTATTA TGCAGGAATA
ACCGCTTACG CAGATAAAGA TTTTGTAAAA GCAGAAAGAT TTCTAAACAA AGCATCAGAA
TCAAAAAATT CAGAGATTAG AAAGAAAGCA TTGATATATT TAGCAGAAAT CTATTTAATA
AATAAAGATG ATGAAAATTT TGTCAATACA GTTTCACAGC TAAAAGAGTT TGACCAAATC
TATGCATATG ATTTACTTGG TTGGTACTTT TACTTAAATG GAGACTATCA AAACGCTTTT
AAAGCCTTTA AAGACCCATA TATGAAAGCA GTATCAGCCT TTAACGCAGG AGATTTAGAA
GCTGTTAAAA ATATAATTCA AAATAGAAAC GATAGAAAAT CAAAGTTTTT ATTAGTTTAT
GTTTACATCA AAGAAAACGA CCTTGAAAAA GCAAGAGAAG TGTTAAAAGA GCTGCTAAAT
GGAGATGATT TAATTGCAAA AAAAGCATAC TATCTTTATG CTTACACATT TTTCTCCTCA
GGAGATTTTG TAAGAGCATC CCAAGAGTTT AGCAAATTTT TAGAAAAATA TAAAAATGAT
GATGATATAT ACACAAGGAA AGCACTTCTT AGACTTGCAG ATAGCTACTA CAACCTTGGA
GAAAGAGACT TAGCAGTAAA TATATACAAA GATTTCATAA CCAAATACTC AGGTACTAAA
GATAGTATTG ATGCTGCCTA CAATTTAATC ATTCTTGAAT CTAAAGGTTC TTCTGAAGAT
GTGGAAAGTA TGATTAAAAG CTTTTTGGCT AAATATCCAA ACTATCCTTT AGCAAATATT
CTAAAAATCC AGCTTGCAGA GATTTATCAA AACAAAGGAA AAATAGAAGA TGCTATTAAA
ATTTATCAAG AAGTAGCGGC ATCAAATAGT AAAGAATCAG CCCTTGCTAC TTACAAACTT
GCAGAAAGCT ACTATAAACT AAACCAACTT GACAAAGCAA AACAAGTTTT AATAGATTAC
TTAAATACAA ACAACGAAGA ATATAAAGTT CCAAGTAAAT TACTTTTAGC AGAAATCTAT
GAAAAACAAA ACGATTTAGA CAATAGCATA AAAATCTATG AAGAGCTTAA AGAAAATGAT
GACGTTAAAT TTAAACTTGC AAAAATACTA CTTCAAAAAG GGGATTATGA TAAAGCATCA
GCATACTTTA AAGAACTTTT AGAAAAACAC CCTGAAAAGG TTAATGAACT TAGCTTTTAT
ATTGGAAAAA CATATTATCT TATGAACAAT GAAAAAGATG CTGTAAGTTA TTTAGAAAAT
GGGACAAAAT CCTCAAACTA CAACGACGCG GCAGAAAGCT ATTACCTCCT TGGTATGATT
TATAATAAAG AAAATCCTAA TAAAGCGTTG AACTACTTTT TAAACGGAAT ATATCTATAT
CCAGAAGCAA AGGATATTAC AGCAAAATCG AGAATCGAAG CTGCAAAAAT CTTATTAAAA
GCTGAAAAAA GAAAAGAAGC ATCTTGCCTG CTTACACCTT TACAAAATTA CGAAGATGAA
AATATTAAAA ATACAGCCAT AAACATTTTA AAAGATTTAC CAAAATGTGT GAGGTAG
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| Protein sequence | MKVLNSRSLE LFSQNEKESL IKLNIILALV LTLFFCSYAE VKVPEVVFPL EITTKITEEK
PYLEPPNTLE LKTLNEELNI TQYIKPKKPT DVKLPVLTIE KPTAYLGIPP SNALLSDAID
YYNKGDLLFA ESSLEKFIEK YKDHKNLFYA YYLLGVVKYN LGKYLEAESN LSKSCEILKT
KEACLSSAIV NIMLGNQEKA KFLLSQFDKD IDVSFYNQVI NLLSGGKADF NNINCDNLDI
GSIEYCQYIQ KYYNFSVGNF LKALKIKYTG KNKQLIYDSI LIDGFSYYYT GDYQNALEKF
NLILKENTNG YVYNLALYGK ALIDSNNIDD YAGVLQSRDE LLAHYLYIKL ANERFKKGDY
LDAFIYFQNA IKLTDKNKTY LKLAIATSLY NLKNYDYALK LFSDLTTETK DPEVFYYAGI
TAYADKDFVK AERFLNKASE SKNSEIRKKA LIYLAEIYLI NKDDENFVNT VSQLKEFDQI
YAYDLLGWYF YLNGDYQNAF KAFKDPYMKA VSAFNAGDLE AVKNIIQNRN DRKSKFLLVY
VYIKENDLEK AREVLKELLN GDDLIAKKAY YLYAYTFFSS GDFVRASQEF SKFLEKYKND
DDIYTRKALL RLADSYYNLG ERDLAVNIYK DFITKYSGTK DSIDAAYNLI ILESKGSSED
VESMIKSFLA KYPNYPLANI LKIQLAEIYQ NKGKIEDAIK IYQEVAASNS KESALATYKL
AESYYKLNQL DKAKQVLIDY LNTNNEEYKV PSKLLLAEIY EKQNDLDNSI KIYEELKEND
DVKFKLAKIL LQKGDYDKAS AYFKELLEKH PEKVNELSFY IGKTYYLMNN EKDAVSYLEN
GTKSSNYNDA AESYYLLGMI YNKENPNKAL NYFLNGIYLY PEAKDITAKS RIEAAKILLK
AEKRKEASCL LTPLQNYEDE NIKNTAINIL KDLPKCVR
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