| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0311 |
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| Symbol | |
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| ID | 6331622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 319344 |
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| End bp | 320429 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656596 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001930510 |
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| Protein GI | 188996259 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0146421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA AAATATTTGT AATCTTAGCT ATACTTGGTG TTATAGCTGG TATCGTAAGT
GCTTATATCT ATGGACATAC ACAAAAACCA CTTCCCCCAG TGTATATGAC AAAAAATCCT
TATAAAAATG GTGTTTATGC TAATGGTATT ATAGAACCAG TGCAAGATAG TGGAGAAAGT
ATAAACGTTT ATCCAGAGGT ATCTGGAAAG GTTGTGAAAG TTTTTGTAAA ATATGGTGAA
CATGTTCAAG AAGGGCAACC GTTATTTCAA ATAGATGATA CTGTTCAACA ACAAACTGTA
AAACAACTGT ATCATCAAAT GCAGGCAAAC TATATAAAAT ACCAAGAGCT ATTAAATGAA
CCAAGACCTG AAACGTTAGC GGTTGCAAAG GCTCAAGTGG ATTACGCTAA TGCTCAAGTA
CAATATGCAG AATCAAACTA TCAAAAACTC TTAAAATCTT ACGAGATAAA CCCAAAATCT
GTATCAAAAC AAGATTTAGA TAATGCAAAA TATGCTCTTG AAGAAACAAA ACAAAATTTA
AAATTAGCTA TGAAAAATTA TGAATTAACA AAAGCTGGTG CGTGGAGCTA TGATATAAAT
ACCCAATATC AGATTTATAA ATCTGATGAA TATGCCTACA ATAATGCCTT GGAGTTATTT
AAAAAATATA CAGTTAAGGC TCCTGTATCA GGTACAGTGT TGGAATTAAA TGTAGCTAAA
GGAGATTATG TATCTCCTCA GGGTGTTTAT TATACTTATA CAAGATCCTA TATTACTCCA
ATAAGACTTG GACAAAGTTC CAACAATGAG CTTCAAGTTA AAGCTTTCAT AGATGAGATA
CTTCTTACAA AGCTACCACC AATAAAAGAA CTAAAAGCTG TTATGTTTAT AAGAGGTACA
AATATCTCAG TACCTCTAAA ATTTATAGCA GTACAGCCTT ATGTAACACC TAAGATAGAA
CTGTCAGGAG CGATTACTGA AAGAGTAGAT GTAAGGGTTT TACCTGTTAT ATTTAGATTC
GAGAAACCTC AGAATGTAAA TCTCTACCCT GGACAATTGG TAGATATATA TTTAGAGGGT
AAATAA
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| Protein sequence | MKVKIFVILA ILGVIAGIVS AYIYGHTQKP LPPVYMTKNP YKNGVYANGI IEPVQDSGES
INVYPEVSGK VVKVFVKYGE HVQEGQPLFQ IDDTVQQQTV KQLYHQMQAN YIKYQELLNE
PRPETLAVAK AQVDYANAQV QYAESNYQKL LKSYEINPKS VSKQDLDNAK YALEETKQNL
KLAMKNYELT KAGAWSYDIN TQYQIYKSDE YAYNNALELF KKYTVKAPVS GTVLELNVAK
GDYVSPQGVY YTYTRSYITP IRLGQSSNNE LQVKAFIDEI LLTKLPPIKE LKAVMFIRGT
NISVPLKFIA VQPYVTPKIE LSGAITERVD VRVLPVIFRF EKPQNVNLYP GQLVDIYLEG
K
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