| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0310 |
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| Symbol | |
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| ID | 6331621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 317957 |
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| End bp | 319342 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642656595 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001930509 |
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| Protein GI | 188996258 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0728642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TGATCATTAT CCTTATCCTT GGTATAAGCG GATTTATATT AAACTCTTGC
TCTTTTTATG CAAAACCTAC AGATGTATCT ATTGAATATC CTAATTTATT TAAAGAAAAA
CTGGAAAATA CAAATGCAAG TATAGATGTA CAACATTGGT GGAAGAGTTT TAATGATGAA
ACCTTAAATT ACTATGTAGA TTTAGCTTTA AAAAATAATC CAAATTACCT TATAGCATTA
AAAAATATAG AGCTATCAAA AGCATACGTT TTAGAAAATT CATCTGCCCT TTTCCCAAAT
TTTAACCTAA ATGGTTCTGA AACAAGGCAA AAAGTTTCTC AAAGGACACC AAATGGAAGG
TTTTTTAGTA CGACACCTTA TACTACATAT AATCTTTCTG TTAGTGCTTC TTATGAAATA
GACCTTTTTG CAAAAGCTCT AAACGCTTAT AGATATTACA AAGAAAATGT AAAAATAACA
GAGGCCCAGG CTAAAGCAAT TAAAAATGCC CTTATAATGA ATACTGTAAA CAATTACTTT
CAGATAATAG AAAATGGTCT ATATATAGAT ATATTAGAAG AACAATTAAG AATAGCAAAA
GAAAACTTAG AGATTTTAGA AACAAAGTAT AAAGCTGGAG TAGTATCTTA TCAGAACATA
GATCAAGCTA AAATCTCAAT ACAAAGCTTA GAACAAACAC TGCAAAGCTA TAAAAATCAA
AGAAGTATAC TCATAAACGC ATTTGCATAT CTTTTGGGTA AATATCCAGA AGAATTTAAA
TTCTCCGCAT CTGGAGACAT ACCAAAAGAG ATTAAACTTC CAGAAGCTAT TCCTTCAACA
GTAATGACTG AAAGACCTGA TATTCAAGAA GCTATATCTA ATGTGATAGC AAACGATTAT
GAAAAGAAAA TAGCATTGGC AAATTTTTTT CCGTCTTTTA ATCTAACTGG TTCTTATGGA
TTCCAATCTA AACAATTAAG TAACTTAATA ACTCAACCAA GTGTAGCATG GAATTTCGGA
TTAAATATAA TAGAGCCCAT ATTAAACTGG AACAAAAATA TAGGTAATTA TAAAGCCTCA
GAAATAGCTT TAGCTAAAAG TATAATAAAC TACAGACAAA CAGTATTAAA TGCTTTTAGA
GAAGTAGACG ATGCCATATC TCAATATAAA ACAGATAAAC TCAATTATAA AAATTTAAAA
ATAATTTATC AAAATACTTA TGATCAATAT GAGATAGCTC TTGCAAACTA TAAAGCAGGT
ATAATTCCTT ATTCCATATT GTTAAATTAT AAAACAAATC TATTAGATGC CAAAAAAAAC
CTTCTAAATC AGAGGCTAAT TCTAATTCAA GATGTAACAG CCTTATATAA TGTGCTTGGA
TATTAA
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| Protein sequence | MKRMIIILIL GISGFILNSC SFYAKPTDVS IEYPNLFKEK LENTNASIDV QHWWKSFNDE
TLNYYVDLAL KNNPNYLIAL KNIELSKAYV LENSSALFPN FNLNGSETRQ KVSQRTPNGR
FFSTTPYTTY NLSVSASYEI DLFAKALNAY RYYKENVKIT EAQAKAIKNA LIMNTVNNYF
QIIENGLYID ILEEQLRIAK ENLEILETKY KAGVVSYQNI DQAKISIQSL EQTLQSYKNQ
RSILINAFAY LLGKYPEEFK FSASGDIPKE IKLPEAIPST VMTERPDIQE AISNVIANDY
EKKIALANFF PSFNLTGSYG FQSKQLSNLI TQPSVAWNFG LNIIEPILNW NKNIGNYKAS
EIALAKSIIN YRQTVLNAFR EVDDAISQYK TDKLNYKNLK IIYQNTYDQY EIALANYKAG
IIPYSILLNY KTNLLDAKKN LLNQRLILIQ DVTALYNVLG Y
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