| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0279 |
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| Symbol | rplE |
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| ID | 6332722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 289519 |
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| End bp | 290082 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656559 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001930478 |
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| Protein GI | 188996227 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000257313 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGCAG TAGTAGGGTA TAAACCAAGA CTTCAAACTA AATATGAGCA AGAAGTTGTG
AAGAAACTTA TGGAAAGATT CGGTTATAAA AGCCCAATGC AAGTTCCAAA AATCAAAAAA
GTAGTTGTCA ATATGGGTAT TGGAAAAGCG ACAGAAGATA TTAAATTATT AGATAGAGCG
GTGGAAGACC TTACAGCTAT TGCAGGTCAA AAACCTGTAA TCACAAGGGC TAAAAAATCA
GAAGCTGCTT TTAAATTAAG AAAAGGGCAT CCAATTGGTG CTAAAGTAAC ATTAAGAAAA
GATAGAATGT GGGACTTTCT TGAGAAGTTA ATTTCTGTAG CTCTTCCAAG GGTAAGAGAC
TTTAGAGGCC TTAATCCAAA ATCATTTGAC GGTAGAGGTA ATTACTCATT TGGTTTATCT
GAACAAATTA TCTTCCCTGA GATTGATTAT GATAAAGTTG ATAAAATCAG AGGAATGGAC
ATAATTATTG AAACAACTGC AAAAACTGAC GAAGAAGCCC TTTGGTTGTT GTCTTTAATA
GGTTTACCAA TCAGGTCAGT ATAA
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| Protein sequence | MAAVVGYKPR LQTKYEQEVV KKLMERFGYK SPMQVPKIKK VVVNMGIGKA TEDIKLLDRA
VEDLTAIAGQ KPVITRAKKS EAAFKLRKGH PIGAKVTLRK DRMWDFLEKL ISVALPRVRD
FRGLNPKSFD GRGNYSFGLS EQIIFPEIDY DKVDKIRGMD IIIETTAKTD EEALWLLSLI
GLPIRSV
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