| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0228 |
|---|
| Symbol | |
|---|
| ID | 6331416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 245258 |
|---|
| End bp | 246256 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642656506 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001930427 |
|---|
| Protein GI | 188996176 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000772212 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA TTTATTACGA TGAAGATGCA TCTTTAGACT ATCTAAAAGA TAAAACAGTT
GCAATTATAG GATACGGTAG TCAAGGGCAT GCTCATGCGT TAAATCTAAG AGATAGCGGA
ATAAAAGTTA TAATCGGTCT ATTGGCCGGT AGCAGGTCGA TTGAGAAGGC AAAAGCAGAA
GGATTTGAAG TTTACTCACC GGATGAGGCT GCGAAAAAAG CAGATGTAAT AATGATTCTT
ACACCGGATA CGGTTCAACC AGCATTATAT CAATCGGCTA TCTTACCAAA CCTTGACGAA
GGCAATGCAC TTGCATTTGC ACATGGATTT AACATACACT TTGGACAAAT AGTTCCTCCA
TCTTATGTAG ATGTATTTTT AGTTGCACCA AAAGGACCTG GTCATTTAGT AAGATGGATG
TACGAAGAAG GAAAAGGTGT TCCTGGATTG TTTGCAGTTT ATCAAGACTT TACAGGAAAA
GCAAGAGAAA TAGCAATGGC TTATGCGAAA GGAATTGGAG CAACAAGAGC AGGATTGATT
GAAACAACAT TTAAAGAAGA AACAGAAACA GACTTGTTCG GAGAACAGGC AGTTTTATGC
GGTGGAGCTA CAGCTTTAAT AAAGGCAGGA TTTGAAACAT TAATAGAGGC TGGATATCAA
CCGGAGGTTG CATATTTTGA ATGTTTACAT GAATTAAAAC TTATTGTTGA TTTAATATAT
CAATATGGAA TCTCCGGAAT GAGATACTCT ATTTCTGATA CAGCAAGATA CGGTGACGTT
ACAAGAGGAA AGAGAGTTTA CGAAGCTGTA AAACCTCTTT ATAAAAAAAT ACTTGAAGAA
ATTCAAGAAG GCGAATTTGC TAAGGAATGG ATTTTAGAAA ACGTAGCTAA CAGACCACAC
TTTAACGCAC TTGTCAAAAA AGATGAAGAA CATCCAGTAG AAAAAGTAGG AAAAGAGTTA
AGAAAAATGA TGCCTTGGCT TGGCGGAAGA GGTTTATAA
|
|---|
| Protein sequence | MANIYYDEDA SLDYLKDKTV AIIGYGSQGH AHALNLRDSG IKVIIGLLAG SRSIEKAKAE
GFEVYSPDEA AKKADVIMIL TPDTVQPALY QSAILPNLDE GNALAFAHGF NIHFGQIVPP
SYVDVFLVAP KGPGHLVRWM YEEGKGVPGL FAVYQDFTGK AREIAMAYAK GIGATRAGLI
ETTFKEETET DLFGEQAVLC GGATALIKAG FETLIEAGYQ PEVAYFECLH ELKLIVDLIY
QYGISGMRYS ISDTARYGDV TRGKRVYEAV KPLYKKILEE IQEGEFAKEW ILENVANRPH
FNALVKKDEE HPVEKVGKEL RKMMPWLGGR GL
|
|---|
| |